BlTCONS00000228 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00000228
Unique NameBlTCONS00000228
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000000:1407178..1407803+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00000228 ID=BlTCONS00000228|Name=BlTCONS00000228|organism=Branchiostoma lanceolatum|type=mRNA|length=626bp|location=Sequence derived from alignment at Sc0000000:1407178..1407803+ (Branchiostoma lanceolatum)
GAATAAGTGCACATTGCCTGGAAATTGAAAAAGGTCGCCATCGCAATATA
TCGGCAGACCAGAGACGTTGTCCTTCATGCCAAGATAGTATTGAAGACGA
GTACCACTTTCTTATAACATGTCCTACATATAATGCTGAAAGACAAGTGC
TTATGCAATCAATTACATGTAAGTCAAATATTACCCTACCTTACACAGAT
AGCGATACATTTAATGTACTTATGTCATGTCCAGATTCCATATCTATCCA
CCTAGGCCAATATATCTACCACGCTATGCAAAAACGAAACTGTACCATTC
CTGAATGAGAATTGACAAATGTAAAGTCGCAAATTAGACTAGAAACACGC
AACACAATGTCTGTAATTTAGATATAGCTCCACGTTGTAATTAAAGTAGA
TTGCATTTGATGTAGCGTTATAGTAATTAGAAATTTCCTTAGATTACAAT
TACCCTAGAAAAACAACCCTTAGTCTGTACTAGCTATTAGTATCTATGTT
GCAATGGCCATAGATCACACTGGATATAGTATTATAGTAAGTAGTATATT
CTTATACATGTATAGAACTAGATTGTTACCTATGTTGTCTGTAATTTGCC
ATACATTGTCACTGATGCAATTGTTG

Coding sequence (CDS) from alignment at Sc0000000:1407178..1407803+

>BlTCONS00000228 ID=BlTCONS00000228|Name=BlTCONS00000228|organism=Branchiostoma lanceolatum|type=CDS|length=306bp|location=Sequence derived from alignment at Sc0000000:1407178..1407803+ (Branchiostoma lanceolatum)
ATAAGTGCACATTGCCTGGAAATTGAAAAAGGTCGCCATCGCAATATATC
GGCAGACCAGAGACGTTGTCCTTCATGCCAAGATAGTATTGAAGACGAGT
ACCACTTTCTTATAACATGTCCTACATATAATGCTGAAAGACAAGTGCTT
ATGCAATCAATTACATGTAAGTCAAATATTACCCTACCTTACACAGATAG
CGATACATTTAATGTACTTATGTCATGTCCAGATTCCATATCTATCCACC
TAGGCCAATATATCTACCACGCTATGCAAAAACGAAACTGTACCATTCCT
GAATGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000228-exon-Sc0000000-1564993656:1407178..1407803BlTCONS00000228-exon-Sc0000000-1564993656:1407178..1407803Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000228BlTCONS00000228-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000000genomeSc0000000:1407178..1407803 +
Properties
Property NameValue
GeneIDBlCUFF000116