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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000000:1362516..1369946+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00000226 ID=BlTCONS00000226|Name=BlTCONS00000226|organism=Branchiostoma lanceolatum|type=mRNA|length=7431bp|location=Sequence derived from alignment at Sc0000000:1362516..1369946+ (Branchiostoma lanceolatum)
CACTGTCCCGCGCAGGGGCTTGTGGGATAGCCGGCTCCAAGATGGCGCTG
CAATGCCAGCGGAACAGCTACCTCGCGGAAGTAAGGAGTTTTCTCTCGGG
ATTAGGAGAAACTGCGCCTAAATAAGGGAGTAATCTGTGGAAATAGACAT
CTTCTTATGATCTTTGTGCAAAATACGTGTCTGGTTGGCATGAAACTGCA
CTGGAAATGATCGTTTTGGGTCTTGTCGAAGGGGGGCGTTTCACATGTGG
ACATCACGAATGTTTTGTTAGTGATAATTTTAGATTTTAGGGCAGTCCAA
TGTCCAGATATTTCTCCAAAATCGATATTTAGAGATCGAAGTGCAGGTTT
ACGTAATCATTTCTTTATCTACTACAACTGTATCGAGTTTGTGTTATCTC
GAAGGAAGGAAATGTGCTCAGAATGTTATAAGTCTTGTTTAAATGCATTT
GTCAAGGAAAACCCAGAGGGAAGCATGACTAGCCTCTACCAGGCTCCCGT
CCTATCGTTGGGAAAATAGTAGAAATCAGCCGAGGCACTCCGCTATACAG
GGTAGTCCGCTATACAGTGAAGCTCCATTATCGATAATAGAGCTTCACTG
TATAGCGGACTACCCTGTATAGCGGAGTACCTCGGCTGATTTCTACTATT
TTCCCAACGATAGGACGGGAGCCTGGTAGAGGCTAGGTATGCATGAGGGG
ATCCCGGCAATGCTTAATGATAGATTTACGAGAGCCAGAAACGCATAACA
GCAAAATCAGGTGGGCTGGCAAATTGGATGATGGAAATTTGTCATTGCTT
AAGAGTTTTGGGAACGATTTTATTTGATAGTTTCACTGTATCCATGGGGT
GTCTGGCAAAACTTGAGATTGACGATACAAGTGGATGACTGTTTGGGCAA
TGTGGCATTCAATACAAAAAATTCATTAATGAACACTTAACGATGAATTC
AGGATAACAAATACTAGTAATGTTCTACGTTGATATTAGGATCAATTACG
CGTTACGAATAATTTGGCAACAACATTTGAATTATGCCGGACTAGGATTA
ACAGTGAATTGAAATAGCCTCATTTTAAAAACTTGTGGTCCATTCTAAAT
ATGTCATAATGGTTCAGTATGGATTTGCAAATAAGAGTTGTCCGTTCTTG
TTTTCCTTGCAGTTTTCCAGCAAAGTTGTGTCATGTGACCCGGGTCAGCT
GGTCATCACCAAGAAAAAGAAGCAGCCAGGTTATGAGGTCATCTTGGAAG
ATACCATTCTGTTCCCCGAGGGGGGAGGGCAGCCTGATGACAGAGGAAAG
GTACAGTGAATATTGAATTTTTGCGTTGGTTTTATTTTCGCCTTTTTCAT
GGGCACCTGTCTATCGCAGCTTCATGAAAGCATGAATATGACTACTCTAC
TACAAAATTCAAAGAAAAAGAAAAAGTGATACAAAAGCTACCTGCCACTG
AAAAATCAGGACAACAGTATGTCCATGGCAAAAGATATGAAAACTGCAGT
ACCAAGGTTGGCCACCAGGGGGTCCAAAATTGACTGTGACCCATCCACAA
CATCTACCCACATATCAAATATCAGCACCTTCCATCCAGAGGTTCTTAAG
ATATTCACCACATACGCACGCACACAAACACACAGACAAACAGGCCCAAA
GCTATAACTTCATTTTTCATGGTGGTAATAAAGAAATTTTTTAACTCAAA
GCTTGTTCTTTTCTGCTCCTACCTGTAGATCAATGATGTGGAGGTCATCA
GAGTGACGAGGAAACAGAACCAGGCCGTCCACTTTGTGGAGACCCCTCTG
GAGGTGGGGGCAGAGGTCAAGATGGAGGTCGACTGGACAAGGAGGTTTGA
CCACATGCAGCAACACTCAGGTGACTAAATATAAAATACAACCCATAGGC
TGGAGTGGAGGGTGATCAGACCCAGAGGAGGGATGGAACTGAGGATGATG
CAGAATACACCGTGTTGTATTTTATATTTATGTCATACCCACCCGAAAAA
AAACACATTTCAATTCAAAATGCATCAGAAGCTAAGAGAATTTCTGTCCT
CGAACAGCAATTCCAATTCAATTTCGACAGCGGCGCAACAGGCACATGCA
AAGCGCATTCGAATTACTCAATGGAAGTCTGTACAATGCGACTTCAAAGC
CTGGGCAATACGGAAAAATGTAGACCGGTCCTGAACACCCATATTGAATG
TTATCCCAGCCCAGGTATGACATGTTATACAGGTAGATGCTTACAAGTTG
TACATGGATACAACTTCAATGGATTGTGTGTTTGCCAAAAGTAACTATTT
GCTGGAACATGAACGTTGTATTTTCCTTTTAGGCCAGCATTTGATTACTG
CGGTTGCAGAGGCAAAATACGGATACAAAACAACATCATGGTAAGTTCTG
GTGTTTCCCAAGTTTGTTAGACTTTGCTGAGTTTGCAGTCATAGTTGTGG
GGAAAAATGACTTTCAGTGCTGTTATCTTTCTGTGGACATTCTTTGCACA
ATTACAAATTGCACAATGTGACGTTCTATCTGCAAAACTTGAATAAGTGT
AATAATTTTTGCAGCATATAGACTCTGAATTCCACGTCACAATTTAACTC
ACTTTTTCTTCTTTAGATGTGTAGAGCCAAAGATCAAAATTGATATTTTG
CATTCAATGTAATATCTAAAAAAGATGCTTGATTTGGAATACTCCACATT
CTTTCCACAAATTGTGACAATTATCTGCAATTAGCCAACCAAGTCTCTAA
GTTTGGAAGATTGTAGACTCTGACTCTCATCGTCATATTTTTTTTCAAAT
TTTCTTCCTAAGAGTTGTAGACTAATCATGAGACAATGATCAGAAAGAAC
ATTTTTCAATAAAATCTAAAAGGAAATATTTGTTTTGCCATGATTGCAGG
GACCTGGGCAGTAAAATCTCCTCTATAGAGATGGACACTCCCACCATAAC
CTTGGAGCAGTTATCCGAGCTGGAGAAGGAAGTGAACGAGTGCATCAGGA
GACAGATCCCCATGACTCCTCGACTGTTAGAACCTGGGTCTCCTGAACTG
GAACAGGTTAGAACAGGGTACCTAGGTCATCGGGTCCAGAGGGAGAACTG
ATGTGTTATGTGTAGTGGTTGGGCTGTGTAGCTAAATGTAACATCCGGTA
CAATTACAGGTACGTATATACCTGTGTAGAAGTTTAGGTACAGGCCCAGA
CCTGTATCTGGACCTGAACTATTTGACAGAGTAACCTGGCTGTGGTCTTC
AATGATGACAGAAACATAAATAAACAGTTAACAGGATGTTTATTTAGACT
TCAGGTAATCATACAGAGAATCCATGTTGATCTCAAAAAGTCTAATCAAA
GTTGGTGCTGATTTCAAATGGGAACTGAATTGCATTTTGAGTGACAGATT
ATGCAATAAAATGTGTGTTGCAGCCTTGTGGGCTGTTGAATGATTTTGTC
GTAGCCAGTACCTACCAATCTTTTTTGGAATTTCTCAGAAGTTTGGTTCT
AGTTTTGAAGTTGGCCTTGTTACAGATGATAATGTAATTTGTGTGGTTGC
TAGGTACGGTCCCGAGGCCTGCCTGACGACCACATCGGCCCCGTACGTGT
TGTTGAGATTGAGGGCATCGACCACAACACCTGCTGCGGAACCCACGTGT
CCAACCTGGCACATCTGCAGGTGAGACAAGACTAGACACCTGTGTCGGGA
GGATGGGCTTGGGGGATTGTATATGGCCTCTGTTGATCAATATTGTACAC
AGCAGGACGATTTAGGCTTTTCATTAAAGGGTCAAACAAAAAACAACAAA
AAATGTCTGAACCTTTTAAAATACCCTCTATATGTTTATATCAATGTCAT
ACCTGGGCTGGGATATCATTCGATACAGACTGGTCTTATTTCACGGTATT
GCACAGGCTTCCAAGTTCTATTGCATGGGCTTCCATTGAATAGTTTGAAT
GCACTTTTTGTGTGCCGAGCGGTGGAAAATTCAAATGCCAAATTGAAACG
TTGGAATTGATGTTGTCACAATTTTGCATGTGCGTTTTTAGGTGGGTATG
ATATAAATGAAATACAATGTTGTATTCTATATGTATCATATCTGATAGAT
GAGATGTATGATACCTTTGAGATGTATTTGAAGTCCATTTTGACAGACTT
TATTCATTTGTCTATTGTCTTAAGGCTATCAAGCTGCTATCAGTGGAGAA
GGGGAAGAAAGGAAAGACGAACGTGATGTTCCTGGCTGGGAATAGAGTGC
TGGAGTATGTAGGGAGGACGTTCGAAAGGGAGAAGGGCCTGACTGTCATT
CTCAAGTAAGTTCAGGGGGGTGCTTGGTAGAAAGAAGAGCTTTTTCTAAA
GCTGCAAAATGTTGAAAGACAACTTGAAAATTTTCATTGGCATCGCATTT
GGCCTCAGTATACACGTATAAAAAAATAAGTAATATTTTCTCCCAATACT
TCTTTGCTCTAAGTTGTGAATAAAAAATTTTGCTCCCTTATAGGTCTTGA
CTGAGTACAAATGTTTTCTTTACTCCCTCTGAAACTAGGTGTTCTCCTGA
AGAACATGTGGAGATGGCAGACAAGCTGCAGAAATCTTTAAGGATATCAA
ACAAGGTCTGTCTAAAATCAACTTGAACTTCATCAATATCAAGACATACA
TACAATGTCTACTAACATACATGATTCCATCAGGGTACATAGTCCGCCAC
CTTGAAAAGATACGTCCAAACAGATCTCCAACTCAACGTCCCCCAGTATA
ATGTACTCCTGTATATCTAAACTATGCATACATGGGGGGTGCTGCACTAT
AGAGATCTCTCAAACCCACTGTTTTTCAAAGTGTCGGATTTATGTAACCT
GGCGGATTAATGTTAATGGAGGTTAGATCTTGAATTAGTTGTGAAATTGC
AGTATGAAATGAAGTTTTGAATTTTCTAATTTACCACACTTTGAATTGTA
CCGATTCCATTTGAGTGTAAGCTTAAGTGAAAGTAAAATGTAATTTTCAG
TCTGTTTGTTTATTTGTTTGTTTGTTTATTTGTCAGACATGTACTAGGTT
ACTCAGTGAAAGGGAAATGTCATTATCTATTTCTTTACCTGTCAGGCATG
TACAGGGCTCCTCAGGGACGTTGCTGTACTAGAAGCACAGAGATACAAGA
GCCAGCCTAACAGGGACCCAGTCTTCTGTCTGCACAGGTAAGGAGAGGCA
TATGTTGGTTCGGTACAGTTTCATTTTCTTTTATTTATACAGGGAAAATA
CTAAATGTACACTCAGGTACCCCTGGTTTCGCAATATAAAAACACAAACT
ACCAATGTTATTTGTTGATGCCCACCGAGCCTCTTTGGGTATTCTGTCAA
AAGTCTGCCAAAAACACACGGATTTCGTACGCCAGTGTGCCAACATCTGC
ACATTTGCCAACAAGAACCATGATTTTTATTTTTTTCTTAATATACAGCT
ACTTCATACCGTTCCTGTAGACTAATGTGTGACCAGACTTTATCAGTTTT
TGTTTCCCATCCCCTATCCAGGAAGGAGGGAGACAGTGAGTTCATGAACA
TCATTGCGAATGAGATTGGAAATGAGGTACAGTAATCATTTTCTATATGA
AACTGAATATGTGTGGAAATGATAAGAAATGTCGGCTAACAAGCAATGCT
TTGAGCGATTTTACAAACTTGTGAAACTCCAATTTCTTATGATTTATTTG
TATCAACATGTAAATGAATGTAGTGTAGCAGTGTAGACAAACAAAAAGCG
ATGTGATACTTAAAATCACCCTGACCATTGAATGATAGCTTCGTGTTGTT
CTAGTCCACTCACTCTTGTGCCCTCTGACCTTACCCAGAATGCCCTTGTG
CTGCTGTCAGTGGGAGATGAGAAAGGGGCGGGGCCGTTCCTCCTGTCTGG
ACCGGCTGACGTGGTGGAGGCTGTCGGACCAAAGTAAGCTCACTACCGAA
AAACGTGGCGTCGTGTGGCGCAACTGTAGAGCACGCGGCTGTCAAACAAT
GGGTCCCAGGATCTAATCCCAGGTGTGCCCAGAGACATGTCCGAACTTGC
GCCCAGACGTTGTGCCCTTGGGAAAGGCACTTAACACGACTTTCCTCACT
TCACTCAGGTGTAAATGAGTACCTAGCTCATCTAGGGATAGGGACGTCCC
TCGGATAGGACGTTAAATGGAGGTCCCGTGTTTGGGGAGAGCAACACCCC
GCGCACGTTAAAGAACCCACCACACCTTTCAAAAAAGAGTAGGGGCATGC
CCCGGTGTGCGATGGTCCAAATCTTACAGTCCGGTCTGGGATGACATCTT
GAAAAGGTGATAGTTCACCTGTTATGTCAATCCTTCCACAAAATGTGGTA
AATCAAAATAAATGAATGAATAAAATAAACTTATGATATTGATTGAAAAT
TATAGCAATACTTCTATAGATGTACAGGATACTTTACTACCTTTGCCAAG
AAGGTTATGTTTTCGGTGTCATTTGTGTGTGTATCTGTCTGTCTGTGGAC
AGTATAACTTGAGAAGTTGTGGATGGATTCTTATGATATTTGGTAGGTGG
GTAGGGGACAGGCAGTTAAAGTATCATTAGAATTACCTTTGACGATTCAA
TATCTTTATCATTCAAAATTTGTCCAACTCTGGTTGTGCAAGTCTATCCA
TTGCAAAGTGTAAACAAGTCTAGTTTATAAGTTTACAATTGAACATCTAT
GTTTTTTGTTACATTTTCCTGTCGTTTATGCATCCAAAGCATCGTCAGAA
TTACCGTTGATGATTCAATCTTTCTCTTTCACCTCAGGGTTGCTGAGGTG
TTGGGAGGGAAAGGAGCAGCTAAGAGAGGGAGGTTCCAAGGAAAAGCCAC
TAAGCTGGCCAACCTTAAGACAGCAGAGGAGATCTTAAGGGAACACTTCA
AGACTCAACAAGCAGCCTGAAGATAACACAGAATACAAACCACTCAGGGG
CAAAGACACACACTCTAAATAAATTGTAAATGTTTGAGCTTTAATCCAAC
ACAACAAAGAAACTCCATGAATTTTAACATGAAAAGCTCAAAACTTACAA
TATGTACTCTACAAACATAGATGAGCTTTCAAGCGAACTCTAGATAAATG
TTTGATAGAGTTGACGGAAAATATAGTTTGAAGATACAGGTGCATTGATA
TTTTTCTGAGCATTTGTACTGACTTTATATGAAAAACAATTGTGCTTTTC
ATGATACACAATTCTTCTTTTGAGTCATGAGTGCTGTTGGGGCCATGATG
CCTGAGTACTAGTAGTACTATGTTCTGGTTTGTGTGTTGCATGCTATGGG
ACCATCTAAGTAAACAAATATTTGTTTGGTTATTATTATGAGAAATTATG
GCTATCATTGTATTAATGAACTGTTGTCAGGAATGTTTCATATCAATATT
GTTTTATCACCTTTTACTACAGGGAGATAGA Coding sequence (CDS) from alignment at Sc0000000:1362516..1369946+ >BlTCONS00000226 ID=BlTCONS00000226|Name=BlTCONS00000226|organism=Branchiostoma lanceolatum|type=CDS|length=1263bp|location=Sequence derived from alignment at Sc0000000:1362516..1369946+ (Branchiostoma lanceolatum)
CTGTCCCGCGCAGGGGCTTGTGGGATAGCCGGCTCCAAGATGGCGCTGCA
ATGCCAGCGGAACAGCTACCTCGCGGAATTTTCCAGCAAAGTTGTGTCAT
GTGACCCGGGTCAGCTGGTCATCACCAAGAAAAAGAAGCAGCCAGGTTAT
GAGGTCATCTTGGAAGATACCATTCTGTTCCCCGAGGGGGGAGGGCAGCC
TGATGACAGAGGAAAGATCAATGATGTGGAGGTCATCAGAGTGACGAGGA
AACAGAACCAGGCCGTCCACTTTGTGGAGACCCCTCTGGAGGTGGGGGCA
GAGGTCAAGATGGAGGTCGACTGGACAAGGAGGTTTGACCACATGCAGCA
ACACTCAGGCCAGCATTTGATTACTGCGGTTGCAGAGGCAAAATACGGAT
ACAAAACAACATCATGGGACCTGGGCAGTAAAATCTCCTCTATAGAGATG
GACACTCCCACCATAACCTTGGAGCAGTTATCCGAGCTGGAGAAGGAAGT
GAACGAGTGCATCAGGAGACAGATCCCCATGACTCCTCGACTGTTAGAAC
CTGGGTCTCCTGAACTGGAACAGGTACGGTCCCGAGGCCTGCCTGACGAC
CACATCGGCCCCGTACGTGTTGTTGAGATTGAGGGCATCGACCACAACAC
CTGCTGCGGAACCCACGTGTCCAACCTGGCACATCTGCAGGCTATCAAGC
TGCTATCAGTGGAGAAGGGGAAGAAAGGAAAGACGAACGTGATGTTCCTG
GCTGGGAATAGAGTGCTGGAGTATGTAGGGAGGACGTTCGAAAGGGAGAA
GGGCCTGACTGTCATTCTCAAGTGTTCTCCTGAAGAACATGTGGAGATGG
CAGACAAGCTGCAGAAATCTTTAAGGATATCAAACAAGGCATGTACAGGG
CTCCTCAGGGACGTTGCTGTACTAGAAGCACAGAGATACAAGAGCCAGCC
TAACAGGGACCCAGTCTTCTGTCTGCACAGGAAGGAGGGAGACAGTGAGT
TCATGAACATCATTGCGAATGAGATTGGAAATGAGAATGCCCTTGTGCTG
CTGTCAGTGGGAGATGAGAAAGGGGCGGGGCCGTTCCTCCTGTCTGGACC
GGCTGACGTGGTGGAGGCTGTCGGACCAAAGGTTGCTGAGGTGTTGGGAG
GGAAAGGAGCAGCTAAGAGAGGGAGGTTCCAAGGAAAAGCCACTAAGCTG
GCCAACCTTAAGACAGCAGAGGAGATCTTAAGGGAACACTTCAAGACTCA
ACAAGCAGCCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00000226-exon-Sc0000000-1564993656:1362516..1362595 | BlTCONS00000226-exon-Sc0000000-1564993656:1362516..1362595 | Branchiostoma lanceolatum | exon |
| BlTCONS00000226-exon-Sc0000000-1564993656:1363678..1363815 | BlTCONS00000226-exon-Sc0000000-1564993656:1363678..1363815 | Branchiostoma lanceolatum | exon |
| BlTCONS00000226-exon-Sc0000000-1564993656:1364244..1364385 | BlTCONS00000226-exon-Sc0000000-1564993656:1364244..1364385 | Branchiostoma lanceolatum | exon |
| BlTCONS00000226-exon-Sc0000000-1564993656:1364848..1364905 | BlTCONS00000226-exon-Sc0000000-1564993656:1364848..1364905 | Branchiostoma lanceolatum | exon |
| BlTCONS00000226-exon-Sc0000000-1564993656:1365415..1365571 | BlTCONS00000226-exon-Sc0000000-1564993656:1365415..1365571 | Branchiostoma lanceolatum | exon |
| BlTCONS00000226-exon-Sc0000000-1564993656:1366069..1366185 | BlTCONS00000226-exon-Sc0000000-1564993656:1366069..1366185 | Branchiostoma lanceolatum | exon |
| BlTCONS00000226-exon-Sc0000000-1564993656:1366690..1366820 | BlTCONS00000226-exon-Sc0000000-1564993656:1366690..1366820 | Branchiostoma lanceolatum | exon |
| BlTCONS00000226-exon-Sc0000000-1564993656:1367054..1367120 | BlTCONS00000226-exon-Sc0000000-1564993656:1367054..1367120 | Branchiostoma lanceolatum | exon |
| BlTCONS00000226-exon-Sc0000000-1564993656:1367611..1367702 | BlTCONS00000226-exon-Sc0000000-1564993656:1367611..1367702 | Branchiostoma lanceolatum | exon |
| BlTCONS00000226-exon-Sc0000000-1564993656:1368037..1368091 | BlTCONS00000226-exon-Sc0000000-1564993656:1368037..1368091 | Branchiostoma lanceolatum | exon |
| BlTCONS00000226-exon-Sc0000000-1564993656:1368354..1368448 | BlTCONS00000226-exon-Sc0000000-1564993656:1368354..1368448 | Branchiostoma lanceolatum | exon |
| BlTCONS00000226-exon-Sc0000000-1564993656:1369303..1369946 | BlTCONS00000226-exon-Sc0000000-1564993656:1369303..1369946 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000000 | genome | Sc0000000:1362516..1369946 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF000114 |
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