BlTCONS00000206 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00000206
Unique NameBlTCONS00000206
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000000:1173871..1180784+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00000206 ID=BlTCONS00000206|Name=BlTCONS00000206|organism=Branchiostoma lanceolatum|type=mRNA|length=6914bp|location=Sequence derived from alignment at Sc0000000:1173871..1180784+ (Branchiostoma lanceolatum)
GTCCACAATGGAGTTCGCCATGAAGATGTTCGACATCGTGAAGGCAGGGT TCGTGTGCATGGCGATGTCCGTGGGCTCCCGGGCCGGGCTGTTCGAGGCC ATGGGGCGGCTGGAGAGGCCGGCCACCTGTCAGGAGATTGCAGACGCCGC CGGGATGCGGGTTCGGTAAGTAGAGGTTCAAAGTTTATTTGTTTGTTTAT TTGGGGTCCCGGGCCGGGCTGTTCGAGGCCATGGGGCGGCCGGGATGCGG GTCCGGTGAGTTTGTTTGTTTTGTTTGCTTAGTTAGGATATCTATTAGTA ATGCTACGGATAATTTTGTGTCCTCGAACAAAGAATTGTAACTCATTGAT ACTAACGTCCGAATCCGTGATCCGAATTTTCGACAGCGGCGCAACTAGCG CACTGGAAGCGCGTTCGAATCATTCGATGGAAACCCGTGCAATACGGTAA AATATAGACCGGTCCGAAATACCCTTATCGAACGGTCCAGATATGACATG AATATAGAATACAACACGGTGTATTCCGCATCGCCCGAGATACCGGCCCG ACCGACGTACGTTCAGGCATGACATAGAACCGGTCATAACACCGATTGGG TGATCCAGCTATCAAAAAGTAAATATTAGCTCTCAAACAAGAGTTACAAC AGGATGATTACTTAGCGATATCATCAAGTGTTTAATGTCGAACAAACGGA TATGTGTCAGACTAAGCTGTGAAAATAGCAGATGATGCAAACAATGTTTC TATTTATGATTTTTGGTCATAGCGAGACTGTTTCTGTCATAAATGTACGC AGATATAAATAATAATTTCCAAATATAGTGACCAAAGAATTACAAACACA GGAAAAGATAGGGTTTTGTAAGTCAGTATATCACCTATTTTCGTCTCCTT ATGCTGATCATAATTATATAAGATAAGTTCTAGGGATGAAATATAGGGTA TAGAATAGACTGTTAAATAGGGCGCTACAGGTACATGTTGTACGTATGTG TGTTATGTGCACGTGAACCCTTTTTTGTTTGTATTGCATACCAGGTAAAC CGATCATGGCATCACACCAGGTTTGTACTGAAGAGTACGTAGGGGTAACG CTCGAAGGTGTAAAACTTTTAACAGCCCGTTAACTACCCGGCGGGGCCCC TTTTTCCGATTGTAACTGCAGCATTACCCTGTGCTCCCAGGTACGTCCGC GAGTGGGTGGGCGCCATGGCAACGTCGGGAGTGATTGACGTGGTGGACAT GGAGAAGGAGACATTCTTCCTGCCGAGACACCGCATCCCCGTCCTGCTGT CACACTTCAGGTTTGTTTGTTTGTGCCTTTATTCAAACTCGATGTTTAAC GCTATCAGCCATAGAGGTCGAGATTCAGCAGGAGTGTCAAGGAGTCAAAT CTTTCAAATTCTTGGTCAACAGAGTTGATTCAAAATATCTAAAAAATATC AATAATAATTAATAGATGATCGTAACAAACAACAATTCTTTTGACATAAT GTCCTGATGTCCATAATCGGTGGATACTGTAATACCGGGTTGAAGAAGAG ACAGAGTGTTCGTCTCAAAAGCTCCCCAGAGCAAACTCTTTATGTTGTGT GTAATGTTTAAATATTTGTCAAAAATAGTAAAGTTCATGTATTCATTCAT TCTCCAGGAGGTCAGTGACCCCGTTCTGTCAGTTGGCGGACTGCTTCGCG CAGGCCACAGGCGAGGTGGTCAAGTGCTTCGCAAAGGACGGTCCGACAGG TATGTGGAAGGGTAGTCTGTGTAACGCACACTCCGCTACCCGGGGCTGCA ATGGCCCTTCCCCGCCGCCCCTGACTATCGGGGCGGGTGCCAGACGTTGC TTTGGTCGGCAATTAAAGCTACTCTCCAAGCAGAGGTTGGTGGAGAAGAT TGTGACCTTTTTGTCATATCCCCAGTATTCTGTCGCGCTCTACACCGGTA GAGAGTGTCAACAGAAAACAGCGCATACATATGATTTTGAAAATGACAAA AAAGGTCACAATCTTCTCCACCAACCTCTGCTTGGAGAGTAGTTAAAGCG CGGTAAAATAAGGCTAGTGGATGGACAGCATTGGGTTACATAAAGTTTAG ATCCTTCCCACACGGTTCGGAGTATCGGGTGGTGCCTATTTTCGTTTCTA TAGCCCTTGGACCACACAGTTGTGCAAGTACTACAAAGGCATCAATATCA GCCATATCTAAAATAAATGATGGTGTTTAATATTTTACCCAAATACCCTA AACATGAAAAAAATGAAAAGAAAGTGATAGTCTTATCATCAGCATCATAA CATCGCATCGACGGAAGACACATCTGTGATTTCCAATGCCATGTAGAAAG TCCCACGTTTGCTAGTAGACTTTAAGCACATTTCTGGGACACATGTTTTA GTCTTTCGCTTGGCCTTGACATGGAAAGTGTCTGGAAACCCCATTAAACC CCACCAAGGCCAGGTTGTGTCCCGAAACACCCAGCCTGTTGAAACGTTTT CGGTAGTCTATGAAAGACCGGATCAAAATATTTCCATCACGATCCAGTCT AAAAATAGCGTAGAAAATCCCGGCGGCCAGATGGGATAGCTAACACATAT ACTTCTGCAGACTTTTGGCTTTCGGGTGACTTACCAAAGGAAGGATCCCC TCCGTGTAAACGATACTAGGATTCTAGTAACCTGTATTGTCCACTTTTAT AAACACTGTACCTTCGTAGGCTTTGTCCTACTTTATGAAATGTTATCTTC GTGAAATGGATTCGGTGCTACGATGATGTTACCGACGATGATGATTGTGA TAATGATGATAATGCTGCTAATGCTGATTATTATAACGATGGTGAGGATA GGGGTGGTGCTGGTGGTGGTGATGATGATGATGCCGATGGTGTTGATAGT GATGGTCATGACAATGATGATGATGATGATGATGATGATGATGATGATGA TGATGATGATGATGATGATGATGATGATAACGATGGTGATAATAATGATG GTGATGATGATAATGACGGTCAGAAGAATGATGGTGATGATGATGATGAT GATAATGGTGATATTGATGATTGACACTTATCAGAATCCATGTTGAATTT TGCAGGAGTCCCGTACTCTGCCTACTCCACGCTGCAGGATGTGATGTACC TAGTGCGCAGGTCACACCATGAGGACACCCTAGTGGACCACTTCATCCCC ACCATCGCAGGGCTCAACGAAAAGCTGGGTAAGTCTTGGAGTGCAAAGTT CTGTCTTACAAAATACCACATTTCATGTTTCATAAGGGTCGTATGAAACG TCTCATGTAGATTCCATTATAGACGCTATCTTAGATCATTTATATACAAT AGTTTTCATGTACTTGGAATATTGTTATAGATCGCTATGTTGTCCATGTC TACTTCCATTGTAATATCTCGTCTTTGTCAGCAGAGCTCTTTGCAATAGC CACAGGCTAGCTGGGCAGCCCTGGCTGTGCATGCTGAACAGCCATATGCA TGTGTTTTGATAGTCAGGCTTGCAAAAAAACGGGTAAGTGGAGACATGTG CTAATGATGTTTTTACAGTACCAATCAATACTCAAACATCGTTGTCCATT GTTCAAACAGAAACCGGCATCCATGTCATTGACCTTGGGTGTGGCAGGGC GGCACCTTCTTTGATCCTGGCTTCACGGTTCCCCAACAGTACCTTCTACG GCATCGACCTTGACGCCAAGGCCATGGCCGCCGCCACCAAAGAAGCAGCA GCCGAAGACCTTACCAACACCTTCTTCGCGGCCCACGACGCCGCCAAGCT GCCCGCTGATTGGTCCAACAAGTTCGACTACGTCACCGCCTTCGATGCCA TCCATGACGTGGCATTCCCGGAAGCTGCTCTCCGCCAGGTCCGCAGGATT CTCAAACCCGGCGGGCNGGTGCTGGTGGTGGTGATGATGATGATGCCGAT GGTGTTGATAGTGATGGTCATGACAATGATGATGATGATGATGATGATGA TGATGATGATGATGATGATGATGATGATGATGATGATGATAACGATGGTG ATAATAATGATGGTGATGATGATAATGACGGTCAGAAGAATGATGGTGAT GATGATGATGATGATAATGGTGATATTGATGATTGACACTTATCAGAATC CATGTTGAATTTTGCAGGAGTCCCGTACTCTGCCTACTCCACGCTGCAGG ATGTGATGTACCTAGTGCGCAGGTCACACCATGAGGACACCCTAGTGGAC CACTTCATCCCCACCATCGCAGGGCTCAACGAAAAGCTGGGTAAGTCTTG GAGTGCAAAGTTCTGTCTTACAAAATACCACATTTCATGTTTCATAAGGG TCGTATGAAACGTCTCATGTAGATTCCATTATAGACGCTATCTTAGATCA TTTATATACAATAGTTTTCATGTACTTGGAATATTGTTATAGATCGCTAT GTTGTCCATGTCTACTTCCATTGTAATATCTCGTCTTTGTCAGCAGAGCT CTTTGCAATAGCCACAGGCTAGCTGGGCAGCCCTGGCTGTGCATGCTGAA CAGCCATATGCATGTGTTTTGATAGTCAGGCTTGCAAAAAAACGGGTAAG TGGAGACATGTGCTAATGATGTTTTTACAGTACCAATCAATACTCAAACA TCGTTGTCCATTGTTCAAACAGAAACCGGCATCCATGTCATTGACCTTGG GTGTGGCAGGGCGGCACCTTCTTTGATCCTGGCTTCACGGTTCCCCAACA GTACCTTCTACGGCATCGACCTTGACGCCAAGGCCATGGCCGCCGCCACC AAAGAAGCAGCAGCCGAAGACCTTACCAACACCTTCTTCGCGGCCCACGA CGCCGCCAAGCTGCCCGCTGATTGGTCCAACAAGTTCGACTACGTCACCG CCTTCGATGCCATCCATGACGTGGCATTCCCGGAAGCTGCTCTCCGCCAG GTCCGCAGGATTCTCAAACCCGGCGGGCTCTTCTCATTGGTCGAAATCAA GGGGAATTCCAAGATATCAGATAACATTGGTAACCCCTTCGGCCCTGTGA TGTATTCTACTAGCCTTCTCCACTGCGTCCCGGTGTCTATGCACTTTAAG GGGAGGGGCTTGGGGACCATATGGGGGAAGCAGTCGGTTTGTACCATGCT CCAGGAGGCTGGGTTGAGACTCCTGGGGGTCATGGACGTTCCGGAGGTAC CGGAAGAGTGTCATTACCTTTGCCAAAAATGAACGTTGCATCGGGAACAA CATTTGATTGTCCAGTTGAAAGTTCGTTGAAAAAAACGGACCCCGTCATA TGATTGTCGTCTTCATGGCCTCTGAAAATGTCAGAAAAATAAGCTGAAGA AGCCAACGACAACATTGCCAATGTGGTCTGAGTTGTGTTCTAACTCACTG TGTTAATGCCACTGCGTACATTGCCTAGGATACATTGTGGCGTACGGTAG AACAATATCGATATCGTTGCTAATGTAGCCATTCTCAGTGCTGTACTTTT AACCCACTGTGTGAGGTTGAATGCCACTATGCATATTGTCTATGGTATAT TCTGGCCTACGGCAAAACAACATCGTTGCCAGTGTGGCCATTGACTGTCA TTGTTCTACTTTTAACTCTCTGTGCCCGGTTAATTGGACGTTGCCTAAGA TGCATTCTGGCCAACAGCAGAATAACACCGTTACCATTGTCAGTGCTGTA CTTTTAACTTAATTTGTCCAGTTGCATGCCACTATGCACAATGCTGCAGA AACGTAAGCACTTGCCCATGACAAAGCGTAAACTATGCCAACTGCTTTAC GTATATGATCTGATATGAATATTACATGTTAACTGAAACGCCAAGGCTTT CCATATACGACTAAGCAATTTTCTTTGCTCATAAATTATCGCTAATAATA TAACATCACTGCCATAATAAGACGTTTTATTGTAGATATGGAATGGCGGG GTTTGTAACTCCAAAACGTCCGAGCAAGGAGGTTTTATATAGAAAACCTC CTTGGTCCGAGCGACTATTCAACTAGTTAACTCATTATGTTTGGATACAC ATCAGATAGCCGTCAAGTTGTTTCGGAGTTTTAGACGATCACATTCTACT GAATATTGTGAGAGATTCATTACAATGTATCAAGTCAATGAAGACATTTG ATCAAAAAAACTCTAACACTGGCATCTCAGCAGTAGGGGTCGGTATAAAC TTGGTCAAAAACATTGCAACTTGTTGGTCATTGGTTAAGTGTTTCGTAAT CATAGAACTTGCTATGTATTTGTTTTGAACTACATGTTTAAAAATGATCT TAAAACCGTATAACCATTTAAAGACAGGTAAACATAGTGCGTTTAATTGT GACTTAACATGCGTTCATTGGTTGCATGTGTGAGTTATTCACCATTTTGT GAATTACAGTTTTCTGACCAACAGTTGTAGTGCAACTACTTATAATGACT TCGTCGACAATGTCCTGCTTATGATCTATGAATGTAACAAAATTATAAAA TTCATAGTTAGAAAAATACAATTTCTTTTTACCATCTCATGATCATATTA ATTGTATTTCATCTGTACATTTCTATCCATGTTTTTGTGTTGTCCCCATT TGACTTACCATAGGTTAATTTCTTTAAGATGTCTACTGAGTACAAAAATA TAACCGTTACCTACGGTATATGTAAAAATTGTTTGTTATAGTTGTTATAG TTGGTAAAACAGATCGCTGAAAGTAATATTTATCATAAACAACTACTATT GTCACATCAACTAACATACTTTGGTAACAAACAGTCGCAGTTAACCATGA ATTCTATTAAAGAAATTCGTCTTTTAGGAGATCGATTATGATTTGATGCA TCTTGTACTATCGTCTATTATGAATTCTATCAAATTTGTCAACTTATCAT TTTACATCCATTCC

Coding sequence (CDS) from alignment at Sc0000000:1173871..1180784+

>BlTCONS00000206 ID=BlTCONS00000206|Name=BlTCONS00000206|organism=Branchiostoma lanceolatum|type=CDS|length=1059bp|location=Sequence derived from alignment at Sc0000000:1173871..1180784+ (Branchiostoma lanceolatum)
TCCACAATGGAGTTCGCCATGAAGATGTTCGACATCGTGAAGGCAGGGTT
CGTGTGCATGGCGATGTCCGTGGGCTCCCGGGCCGGGCTGTTCGAGGCCA
TGGGGCGGCTGGAGAGGCCGGCCACCTGTCAGGAGATTGCAGACGCCGCC
GGGATGCGGGTTCGGTACGTCCGCGAGTGGGTGGGCGCCATGGCAACGTC
GGGAGTGATTGACGTGGTGGACATGGAGAAGGAGACATTCTTCCTGCCGA
GACACCGCATCCCCGTCCTGCTGTCACACTTCAGGAGGTCAGTGACCCCG
TTCTGTCAGTTGGCGGACTGCTTCGCGCAGGCCACAGGCGAGGTGGTCAA
GTGCTTCGCAAAGGACGGTCCGACAGGAGTCCCGTACTCTGCCTACTCCA
CGCTGCAGGATGTGATGTACCTAGTGCGCAGGTCACACCATGAGGACACC
CTAGTGGACCACTTCATCCCCACCATCGCAGGGCTCAACGAAAAGCTGGA
AACCGGCATCCATGTCATTGACCTTGGGTGTGGCAGGGCGGCACCTTCTT
TGATCCTGGCTTCACGGTTCCCCAACAGTACCTTCTACGGCATCGACCTT
GACGCCAAGGCCATGGCCGCCGCCACCAAAGAAGCAGCAGCCGAAGACCT
TACCAACACCTTCTTCGCGGCCCACGACGCCGCCAAGCTGCCCGCTGATT
GGTCCAACAAGTTCGACTACGTCACCGCCTTCGATGCCATCCATGACGTG
GCATTCCCGGAAGCTGCTCTCCGCCAGGTCCGCAGGATTCTCAAACCCGG
CGGGCTCTTCTCATTGGTCGAAATCAAGGGGAATTCCAAGATATCAGATA
ACATTGGTAACCCCTTCGGCCCTGTGATGTATTCTACTAGCCTTCTCCAC
TGCGTCCCGGTGTCTATGCACTTTAAGGGGAGGGGCTTGGGGACCATATG
GGGGAAGCAGTCGGTTTGTACCATGCTCCAGGAGGCTGGGTTGAGACTCC
TGGGGGTCATGGACGTTCCGGAGGTACCGGAAGAGTGTCATTACCTTTGC
CAAAAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000206BlTCONS00000206-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000206-exon-Sc0000000-1564993656:1173871..1174035BlTCONS00000206-exon-Sc0000000-1564993656:1173871..1174035Branchiostoma lanceolatumexon
BlTCONS00000206-exon-Sc0000000-1564993656:1175061..1175180BlTCONS00000206-exon-Sc0000000-1564993656:1175061..1175180Branchiostoma lanceolatumexon
BlTCONS00000206-exon-Sc0000000-1564993656:1175528..1175619BlTCONS00000206-exon-Sc0000000-1564993656:1175528..1175619Branchiostoma lanceolatumexon
BlTCONS00000206-exon-Sc0000000-1564993656:1176976..1177030BlTCONS00000206-exon-Sc0000000-1564993656:1176976..1177030Branchiostoma lanceolatumexon
BlTCONS00000206-exon-Sc0000000-1564993656:1178093..1178160BlTCONS00000206-exon-Sc0000000-1564993656:1178093..1178160Branchiostoma lanceolatumexon
BlTCONS00000206-exon-Sc0000000-1564993656:1178543..1180784BlTCONS00000206-exon-Sc0000000-1564993656:1178543..1180784Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000000genomeSc0000000:1173871..1180784 +
Properties
Property NameValue
GeneIDBlCUFF000102