BlTCONS00000192 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00000192
Unique NameBlTCONS00000192
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000000:1104793..1107867+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00000192 ID=BlTCONS00000192|Name=BlTCONS00000192|organism=Branchiostoma lanceolatum|type=mRNA|length=3075bp|location=Sequence derived from alignment at Sc0000000:1104793..1107867+ (Branchiostoma lanceolatum)
CTGACCCCCTGATACGATAGAAGGAAAGAGCCAGCAGAAGCCCAGGTTTC GTGAAGGAAAACATCATAGGAAGCAGGTAAGACTTACAAGCGTACAAACA AGTATTCTGGTAGCAAGCGTAAGAGTTAAAGGTCATTCCTGTGGAAAAGG GAGTACTGTAAGGTGACAGTTTATATTCTTTTTCCGGATGTGGATATGGT AGAATATTCGTGATGGGGAGGGGGGCGACGAAGCCAAGCAGATACGTGCG GCCTTTGATACTTACACTGGTTTGTTTGTATTCGTCCCCTATGCTTTGGG GTAATGAAAAAATGGCTGTATTGGGCGAAAACACTGAGATAACGGGGGCT TAGACATTAGAACGCAGTAATGTCAGAGTTGTGTCAGTTTTTCCCTTCAG CTCTGATCGACATTCATGGTTTTCCCCGGAAGGTGTAATGACAGGTCTAA CCATGAAAATGATAATATAATCTTATACTTTGTTAGAAGAAATAAGGATT TGTCTAACTGTCCATACAGAAATAGAACATTCCACTGGAAAACGGTGTAT TGGACATCCTGGGATGGAGAGTGACTGCACTGAACACCCTGGGAAGGTGA GTGATAGCAGGGAGCAGACAGCAGACATGGGCCTGTAGCAGGAAACGTGT GATGTGAACTTTCCACAACCTGACTACAAATCAACCTCACAGGTACAGGA GAGCAAAGGCAATATGAGAAGACATGTGGTTACCCTGACTGGTGAAAAAC CCTACAAGTGCGGGGAGTGTGGGTACAGCACGGCTAAAATGGGCCACTTT AACGAGCATATCAGAACCCACACAGGAGATAAACGTTACAAGTGTGACCA GTGCGACTATTCTACTTCAAAAAAACTCCACTTAGCTACACATCTAATAA AAAAACACACCCAAACTAATGAGAGGAATCCGAAACCGTACATTTGTGGG GAGTGTGGGTACAGGACAAATAAAAAGTATAACTTATCCGATCATATGAA AACTCATACAGGAGAAAAACCCTACAAGTGTGACCGATGCGACTATTCTG CAGCACGGAAACCCACACTAAATAACCACCTTAAAACGCACACAGGTGAG AAACCCTACAGTTGTAGTGAGTGTGGATACAGGACGGCTGTAATGTGTAA CCTATATCTGCACATGAAAACTCATACAGGAGAAAAATCTTTCAAATGTG ACCAGTGTGACTATTCTGCTGCACAAAAGGTCCATTTGGACCGGCATATA GCGAGAAAACACACCGGAGAGAAACCCTATATGTGTGAGAAGTGTGGGTA CGGGACAACTCAAAGGTCAGTCTTATCCGTTCATATGAGAACCCATACAG GAGAAAAACCTTACAAGTGTGACCAGTGTGGCTATTCTGCAGCAACAAAA AAATACTTGTGCATTCATCTAAAAACACACGCCAGTGAGAAACCCTACAT GTGTGGGGAGTGTGGGTTCAGGTCAACTCAAAGGTCTAACTTATCCCGAC ATATGAGAATTCATACAGGTGACAAACCTCACAAATGTGACCAGTGCGAC TATTCTGCTGCTGAGAAATCTACTTTGCAGCAACATCAAGCAAGACACGC CGGTGAGAAGCCGTTCATGTGTGGGCTGTGCGGGTACAGGGCGGTTAAGA ATTCCCACTTATCCCGACATATGAAAACACATACAGGAGACAAACCCCAC AAATGTGACCAGTGCGACTATTCTGCTGCACGGAAACCCTCCTTAGATAA ACATAAACGCAAGCACACCGGTGAGAAACCCTAGATTTATGGGGAGTGTG GGTACAGGGCAGTTAAGAATTTTATCTTATCATGAGAACCCATACAAGAG AAAAAAATCTATAAGGGTGACTACTGTGACTATTCTGCAGCTAAAAGCTC ACAGATGAGAGGGCCTACATGTGTTGGGAATGTGTATACAGAACAAGTCA AAAGCCAAGACTCACACTGGGGAAAAGACCAGTGTGACTATTCTGCTACA CAGACACGTTCTTTGGACAAACAGCTAGCACAACACACTGATGGGGAACC CTTCATGTGTGGGGAATCTTGGCACAGGACGGCTCAGAAAAAAAACACCT CATGTGAGCCAAACATGCAAAGGTACTAAAGAGCGAAAGTCCAAACTCTT GGGACCCAATGTACAAGTAACTGTAGTTGCTCTGCAAATGTTGGAGAGGG CCTTAATTAAAAGGAACCTTTTGTAAAGCTGGACCCTACGTCGTAAACAA ATTAAGTCAATATACATCTAAGTGTCTACATATGAGTAGTGAATGTGCAC CTAGCAAAATACGCAAGATAGGCTGTATCTAGAAGTCTGTGATCTATTTT TTTTCATATCACTTTATGGCAGATGAATATTCGGTGTATTTATGAACTTT GAAAAGACGCTGACGAAAGGTCCAACCTTTAAAGGGTCTAACATGTGAAA TAGTTCATCTTATTGACTTGAATGAACTTTTAAACATTTTAAAACTACAA GTTCTTTTGAAAGGATCTCTAACACTACTCCCTAGGTACAATTTCAAAAT TATGCTTATGACACGAGTCTCCATAGATGATTTAAAGCGATGTAAGTACA TGAAATACTGTGATAAACTTTTGTTTTTTTGTGGGTTGGTTTGTTGGGGG TCGGTAAAGTTGTCTTTTTTTATGTATTAATATTCGTATATCATTCTGTT ACTTGCGTTATGTTAATTATGGTTAAGTCATGTTTGATTTATCTTGTTAA AGAAATTTTCTTAAGTTTGTCTTTGTCTAATGTTATGTAACTTTTTTTGT GGCGCTGTGATATAAGTTATATGTAATATGTTTATGTCTTTGTTTTACCG TGCTTCTAATAAAAAGACATTAAATTAAAAAGTTCTGTGATTTGCCGAAG CGTTGTCATCGGCTAAGACCAATGAGAAAAGAGATATTAACATGTCCGTC TGTGACGTGTACGGGCTTGTAAGTGGCTCTTTAACATATCACTTCACAGT TGGTTAAATACATTTTGGACTCATGAAGATTATTTCAGTCACTGGTGAGG GTAGTTGATGCTACATTAAACATCT

Coding sequence (CDS) from alignment at Sc0000000:1104793..1107867+

>BlTCONS00000192 ID=BlTCONS00000192|Name=BlTCONS00000192|organism=Branchiostoma lanceolatum|type=CDS|length=1071bp|location=Sequence derived from alignment at Sc0000000:1104793..1107867+ (Branchiostoma lanceolatum)
ATGAGAAGACATGTGGTTACCCTGACTGGTGAAAAACCCTACAAGTGCGG
GGAGTGTGGGTACAGCACGGCTAAAATGGGCCACTTTAACGAGCATATCA
GAACCCACACAGGAGATAAACGTTACAAGTGTGACCAGTGCGACTATTCT
ACTTCAAAAAAACTCCACTTAGCTACACATCTAATAAAAAAACACACCCA
AACTAATGAGAGGAATCCGAAACCGTACATTTGTGGGGAGTGTGGGTACA
GGACAAATAAAAAGTATAACTTATCCGATCATATGAAAACTCATACAGGA
GAAAAACCCTACAAGTGTGACCGATGCGACTATTCTGCAGCACGGAAACC
CACACTAAATAACCACCTTAAAACGCACACAGGTGAGAAACCCTACAGTT
GTAGTGAGTGTGGATACAGGACGGCTGTAATGTGTAACCTATATCTGCAC
ATGAAAACTCATACAGGAGAAAAATCTTTCAAATGTGACCAGTGTGACTA
TTCTGCTGCACAAAAGGTCCATTTGGACCGGCATATAGCGAGAAAACACA
CCGGAGAGAAACCCTATATGTGTGAGAAGTGTGGGTACGGGACAACTCAA
AGGTCAGTCTTATCCGTTCATATGAGAACCCATACAGGAGAAAAACCTTA
CAAGTGTGACCAGTGTGGCTATTCTGCAGCAACAAAAAAATACTTGTGCA
TTCATCTAAAAACACACGCCAGTGAGAAACCCTACATGTGTGGGGAGTGT
GGGTTCAGGTCAACTCAAAGGTCTAACTTATCCCGACATATGAGAATTCA
TACAGGTGACAAACCTCACAAATGTGACCAGTGCGACTATTCTGCTGCTG
AGAAATCTACTTTGCAGCAACATCAAGCAAGACACGCCGGTGAGAAGCCG
TTCATGTGTGGGCTGTGCGGGTACAGGGCGGTTAAGAATTCCCACTTATC
CCGACATATGAAAACACATACAGGAGACAAACCCCACAAATGTGACCAGT
GCGACTATTCTGCTGCACGGAAACCCTCCTTAGATAAACATAAACGCAAG
CACACCGGTGAGAAACCCTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000192-exon-Sc0000000-1564993656:1104793..1104868BlTCONS00000192-exon-Sc0000000-1564993656:1104793..1104868Branchiostoma lanceolatumexon
BlTCONS00000192-exon-Sc0000000-1564993656:1105312..1107867BlTCONS00000192-exon-Sc0000000-1564993656:1105312..1107867Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000192BlTCONS00000192-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000000genomeSc0000000:1104793..1107867 +
Properties
Property NameValue
GeneIDBlCUFF000093