BlTCONS00000186 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00000186
Unique NameBlTCONS00000186
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000000:1094350..1096425+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00000186 ID=BlTCONS00000186|Name=BlTCONS00000186|organism=Branchiostoma lanceolatum|type=mRNA|length=2076bp|location=Sequence derived from alignment at Sc0000000:1094350..1096425+ (Branchiostoma lanceolatum)
CCTGGTCGGCGCTTGTTCAGCGGTAAATATAGACTTAGGAGTGTTTTTTG CGAACGGTAGTATATTATTCTTGTGATGTTAACAACATAAATAAGCTTCT TATACATATCAGTAGCTCACAGGGAAGTCATAATTTGTATGGCCGAGTGT GATAAGAAGAGCCTTGTATGTTGAGTGATGTTAAAAGTCAATAAAGATAT GCTGTTCCAGGTTGCGGTGCACGTCCCCTGTATCCAGACAGAAACTAGCC TCTGATTCAGCACCGCTGCAATACGCAGGTATGTGTTTATAAAATTCTGG TCAAGTGGCCTGAGTGTATCTACTGTTAAAGTAGATAAATCTAATGAAAC TGTCTTAAATGATTAAGTTTTTTTGCCTTAAATCTTAACAGGTTTATGAT CACAAAAGTCACAAAACATTGTTTTATTTTTACCAAATTAAAGACTGTTG TGCATGCCAAATACCAAATACCATAAAAGTAAATTATGTTATAGAGAGCG CTTTACGTTTCTAGAAATTCTTTAGTCATGATTTGAATGATTTTCGGGTT TTATCTAATTTTGTTTCTTCCGAAACAGGGAACACAGACGGACGGAATTG GTGAAAAAAACATATGCATGTCAGAAACAGCAAAAAGGGACAAGTCTATA CAAATTAGTCATGATATAGATACAAATGTAAATGATCTTTCCCAAACAGA CAACAGAGAAACAAGTGAGAAATACTTTAGAGTAGAAATTGCAGTTCTAG GACAACGCTAGATGCGTCAATATGAGTAGCGATACAGGAACAAGACCACA TGAACGCTGCAAATGTGAGGTGTGTGGGTACACGGTCACCTTCAAATCCC AATTAACCGCACACATGAGAATCCATACAGGAGAAAAGCCCTACAAGTGT GACCAGTGTGACTTTTCTGCAGCAGATAAAGGTAACTTATGCCGACATAT GAGAACTCATTCAGGGGAAAGGCCCTACAAGTGTGACCAGTGCGACTATT CTGCTGCACAGAAGGCAACGTTGGACCAACATCTAGCAAGACATACTGGT GAGAAACCCTACATGTGTGGGGAGTGTGGGTACAGGACAACTCACAAATC TGCATTATTCCGACATGTGAGAACCCATATAGCAGAAAAGCCCTACAAGT GTGACCAGTGTGACTATTCTGCTGCAGAGAAATCCAGCTTGGTCAAACAT CTAGCAAGGCACACCGGTGACAAACTCTACATGTGTGGGGAGTGTGGGTA TAGGGCAACCGAAAGTTCATACTTATCCCGACACATGAAAACTCATACAG GAGAAAAACCCTACATGTGTGGGGAATGTGGGTATAAAGCAACTCAAAGT TCGAACTTATCCCGACATATGAAAACCCACACGGGAGAAAAACCTTATAA CTGTCAATTGTGTGACTACTCTGCAGCTAGGAAATTTCACCTGTCTAGAC ATTTGACAAGACACACGAAAGACACTAAATCTACAATTGCGGCAGATGTA CAGCAGACGACTTCATAATCACTCCATAATCTTGAAAATCCATATGGTGG AAGATCCCCTTTATGAGCTACCACGTTAACTGTAGTGTGAATCTGTACCT GGGCCCGATAACTACTCTGTAGTATATAAATCTACATTAGGGGCAGACGT ATCCAGGCAGGAATGCGAGGATTGTTGCAAATATGCCAAAAAGGGTCGCT TATTTCAATGTCATTATAAAATCATACTTGATATTATATCAATGTAGGCT TTGGTCATGGATAAGTACCTAGGCTATTTTAATGCGTGTTAAGATCGACT GTTTATTTCTGTGTTGTTGTTTTTTTCAACTTTTATTGTATAAGTGTTGG TATATTTACACAAAGAATAAGCTAACATTTGCAACGTACAATAGGCACAT TTTGCATGTACACATGATATGCATATGTACTCTGTTTTCTTAACATTTGT GTTTTTATCTTACAGCGATTTCTATTATGATAACATTTGAGATATTGGGA ACAAAATTTTGGAAATATCTCTCAAAATAAACTGATGTTCGCAAATCCAA TTATTTTGTGTTGGTTTATATTGTCC

Coding sequence (CDS) from alignment at Sc0000000:1094350..1096425+

>BlTCONS00000186 ID=BlTCONS00000186|Name=BlTCONS00000186|organism=Branchiostoma lanceolatum|type=CDS|length=747bp|location=Sequence derived from alignment at Sc0000000:1094350..1096425+ (Branchiostoma lanceolatum)
ATGAGTAGCGATACAGGAACAAGACCACATGAACGCTGCAAATGTGAGGT
GTGTGGGTACACGGTCACCTTCAAATCCCAATTAACCGCACACATGAGAA
TCCATACAGGAGAAAAGCCCTACAAGTGTGACCAGTGTGACTTTTCTGCA
GCAGATAAAGGTAACTTATGCCGACATATGAGAACTCATTCAGGGGAAAG
GCCCTACAAGTGTGACCAGTGCGACTATTCTGCTGCACAGAAGGCAACGT
TGGACCAACATCTAGCAAGACATACTGGTGAGAAACCCTACATGTGTGGG
GAGTGTGGGTACAGGACAACTCACAAATCTGCATTATTCCGACATGTGAG
AACCCATATAGCAGAAAAGCCCTACAAGTGTGACCAGTGTGACTATTCTG
CTGCAGAGAAATCCAGCTTGGTCAAACATCTAGCAAGGCACACCGGTGAC
AAACTCTACATGTGTGGGGAGTGTGGGTATAGGGCAACCGAAAGTTCATA
CTTATCCCGACACATGAAAACTCATACAGGAGAAAAACCCTACATGTGTG
GGGAATGTGGGTATAAAGCAACTCAAAGTTCGAACTTATCCCGACATATG
AAAACCCACACGGGAGAAAAACCTTATAACTGTCAATTGTGTGACTACTC
TGCAGCTAGGAAATTTCACCTGTCTAGACATTTGACAAGACACACGAAAG
ACACTAAATCTACAATTGCGGCAGATGTACAGCAGACGACTTCATAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000186-exon-Sc0000000-1564993656:1094350..1094627BlTCONS00000186-exon-Sc0000000-1564993656:1094350..1094627Branchiostoma lanceolatumexon
BlTCONS00000186-exon-Sc0000000-1564993656:1094928..1096425BlTCONS00000186-exon-Sc0000000-1564993656:1094928..1096425Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000186BlTCONS00000186-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000000genomeSc0000000:1094350..1096425 +
Properties
Property NameValue
GeneIDBlCUFF000082