BlTCONS00000183 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00000183
Unique NameBlTCONS00000183
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000000:1094189..1096425+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00000183 ID=BlTCONS00000183|Name=BlTCONS00000183|organism=Branchiostoma lanceolatum|type=mRNA|length=2237bp|location=Sequence derived from alignment at Sc0000000:1094189..1096425+ (Branchiostoma lanceolatum)
CCCGTTGGTGAGCAGGCTGACGTTCGCCATTTTGTTTTTGCGTCCTCGTC TTCGGTATCAGCCCCTTCGAACTGACGCGATTTTTACGGAATTCCAAACG TCGTGGAGACCGCTAACCACCATAGACCCACGGGTAAGACGTGTGATGGT CGCTAGTGCTTCCTGGTCGGCGCTTGTTCAGCGGTAAATATAGACTTAGG AGTGTTTTTTGCGAACGGTAGTATATTATTCTTGTGATGTTAACAACATA AATAAGCTTCTTATACATATCAGTAGCTCACAGGGAAGTCATAATTTGTA TGGCCGAGTGTGATAAGAAGAGCCTTGTATGTTGAGTGATGTTAAAAGTC AATAAAGATATGCTGTTCCAGGTTGCGGTGCACGTCCCCTGTATCCAGAC AGAAACTAGCCTCTGATTCAGCACCGCTGCAATACGCAGGTATGTGTTTA TAAAATTCTGGTCAAGTGGCCTGAGTGTATCTACTGTTAAAGTAGATAAA TCTAATGAAACTGTCTTAAATGATTAAGTTTTTTTGCCTTAAATCTTAAC AGGTTTATGATCACAAAAGTCACAAAACATTGTTTTATTTTTACCAAATT AAAGACTGTTGTGCATGCCAAATACCAAATACCATAAAAGTAAATTATGT TATAGAGAGCGCTTTACGTTTCTAGAAATTCTTTAGTCATGATTTGAATG ATTTTCGGGTTTTATCTAATTTTGTTTCTTCCGAAACAGGGAACACAGAC GGACGGAATTGGTGAAAAAAACATATGCATGTCAGAAACAGCAAAAAGGG ACAAGTCTATACAAATTAGTCATGATATAGATACAAATGTAAATGATCTT TCCCAAACAGACAACAGAGAAACAAGTGAGAAATACTTTAGAGTAGAAAT TGCAGTTCTAGGACAACGCTAGATGCGTCAATATGAGTAGCGATACAGGA ACAAGACCACATGAACGCTGCAAATGTGAGGTGTGTGGGTACACGGTCAC CTTCAAATCCCAATTAACCGCACACATGAGAATCCATACAGGAGAAAAGC CCTACAAGTGTGACCAGTGTGACTTTTCTGCAGCAGATAAAGGTAACTTA TGCCGACATATGAGAACTCATTCAGGGGAAAGGCCCTACAAGTGTGACCA GTGCGACTATTCTGCTGCACAGAAGGCAACGTTGGACCAACATCTAGCAA GACATACTGGTGAGAAACCCTACATGTGTGGGGAGTGTGGGTACAGGACA ACTCACAAATCTGCATTATTCCGACATGTGAGAACCCATATAGCAGAAAA GCCCTACAAGTGTGACCAGTGTGACTATTCTGCTGCAGAGAAATCCAGCT TGGTCAAACATCTAGCAAGGCACACCGGTGACAAACTCTACATGTGTGGG GAGTGTGGGTATAGGGCAACCGAAAGTTCATACTTATCCCGACACATGAA AACTCATACAGGAGAAAAACCCTACATGTGTGGGGAATGTGGGTATAAAG CAACTCAAAGTTCGAACTTATCCCGACATATGAAAACCCACACGGGAGAA AAACCTTATAACTGTCAATTGTGTGACTACTCTGCAGCTAGGAAATTTCA CCTGTCTAGACATTTGACAAGACACACGAAAGACACTAAATCTACAATTG CGGCAGATGTACAGCAGACGACTTCATAATCACTCCATAATCTTGAAAAT CCATATGGTGGAAGATCCCCTTTATGAGCTACCACGTTAACTGTAGTGTG AATCTGTACCTGGGCCCGATAACTACTCTGTAGTATATAAATCTACATTA GGGGCAGACGTATCCAGGCAGGAATGCGAGGATTGTTGCAAATATGCCAA AAAGGGTCGCTTATTTCAATGTCATTATAAAATCATACTTGATATTATAT CAATGTAGGCTTTGGTCATGGATAAGTACCTAGGCTATTTTAATGCGTGT TAAGATCGACTGTTTATTTCTGTGTTGTTGTTTTTTTCAACTTTTATTGT ATAAGTGTTGGTATATTTACACAAAGAATAAGCTAACATTTGCAACGTAC AATAGGCACATTTTGCATGTACACATGATATGCATATGTACTCTGTTTTC TTAACATTTGTGTTTTTATCTTACAGCGATTTCTATTATGATAACATTTG AGATATTGGGAACAAAATTTTGGAAATATCTCTCAAAATAAACTGATGTT CGCAAATCCAATTATTTTGTGTTGGTTTATATTGTCC

Coding sequence (CDS) from alignment at Sc0000000:1094189..1096425+

>BlTCONS00000183 ID=BlTCONS00000183|Name=BlTCONS00000183|organism=Branchiostoma lanceolatum|type=CDS|length=747bp|location=Sequence derived from alignment at Sc0000000:1094189..1096425+ (Branchiostoma lanceolatum)
ATGAGTAGCGATACAGGAACAAGACCACATGAACGCTGCAAATGTGAGGT
GTGTGGGTACACGGTCACCTTCAAATCCCAATTAACCGCACACATGAGAA
TCCATACAGGAGAAAAGCCCTACAAGTGTGACCAGTGTGACTTTTCTGCA
GCAGATAAAGGTAACTTATGCCGACATATGAGAACTCATTCAGGGGAAAG
GCCCTACAAGTGTGACCAGTGCGACTATTCTGCTGCACAGAAGGCAACGT
TGGACCAACATCTAGCAAGACATACTGGTGAGAAACCCTACATGTGTGGG
GAGTGTGGGTACAGGACAACTCACAAATCTGCATTATTCCGACATGTGAG
AACCCATATAGCAGAAAAGCCCTACAAGTGTGACCAGTGTGACTATTCTG
CTGCAGAGAAATCCAGCTTGGTCAAACATCTAGCAAGGCACACCGGTGAC
AAACTCTACATGTGTGGGGAGTGTGGGTATAGGGCAACCGAAAGTTCATA
CTTATCCCGACACATGAAAACTCATACAGGAGAAAAACCCTACATGTGTG
GGGAATGTGGGTATAAAGCAACTCAAAGTTCGAACTTATCCCGACATATG
AAAACCCACACGGGAGAAAAACCTTATAACTGTCAATTGTGTGACTACTC
TGCAGCTAGGAAATTTCACCTGTCTAGACATTTGACAAGACACACGAAAG
ACACTAAATCTACAATTGCGGCAGATGTACAGCAGACGACTTCATAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000183-exon-Sc0000000-1564993656:1094189..1094321BlTCONS00000183-exon-Sc0000000-1564993656:1094189..1094321Branchiostoma lanceolatumexon
BlTCONS00000183-exon-Sc0000000-1564993656:1094560..1094627BlTCONS00000183-exon-Sc0000000-1564993656:1094560..1094627Branchiostoma lanceolatumexon
BlTCONS00000183-exon-Sc0000000-1564993656:1094928..1096425BlTCONS00000183-exon-Sc0000000-1564993656:1094928..1096425Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000183BlTCONS00000183-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000000genomeSc0000000:1094189..1096425 +
Properties
Property NameValue
GeneIDBlCUFF000082