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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000000:1077221..1082247+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00000176 ID=BlTCONS00000176|Name=BlTCONS00000176|organism=Branchiostoma lanceolatum|type=mRNA|length=5027bp|location=Sequence derived from alignment at Sc0000000:1077221..1082247+ (Branchiostoma lanceolatum)
CGGAATTCCAGAAGGCGTGGACACCATTAGCCACTATATACCTATAGGTT
AGGCCTATGATTGTCGCAAATCCTTCCTGGTTTGTGCTTGTGCCGCATAG
ATTAGAATTAGAAGTGTGTTTGTGATCGGTAGTTGATGGGGAGGGGGGCA
CTGAACTGTAATGCATGGGATAAAACAGCTGCCCTATGTCGATTTCTACC
TTCAATATGCCATTATAATTTAACTGGTGCTCAAATCGCTAACTATGTTG
TTCTATCCCCTGGGAAATATTCGAATCTTCTTACTTGACAAATGTGGATT
TCTATACGGGTCCACTACTGGTGTTCACGGGACAAAGGGATTTCTTAAAA
CACTCACTCTCACTCTCTCCCATAGCTTATTCAGCCGTCGGGGCAGCATA
GGTTTCTGTGAAGGCTCTCCACTGCTGGCGGTTCTCCGCCAGTCTCGTCA
TCTGGTTTGCTGAGTGACCGGTCCACTCCTTGAGATCTGAGATCCACGAC
CGACGGGGACGTCCCCGCGGCCGCGCACCCTCCGCTTTTCCTTGAAGAAT
TGTGTGTGCAAGAGTGCCTTTCGCCCTAGACACGTGTCCGAACCACTGCA
GTTTTTTCTTTTTAACCAAGGACAGGAAACTGTCAAGTGGGCCTTGCAGA
GTGTGGATGCGTTCCTTGACTTCTTTGTTTGTGGTGTGTGATGTCCAGTG
AACTCGTAGTAGTCTGCGATAACAGTTCATTTCAAACGCGTTGATTCTCT
TCGCTATTTCTGCATTAAGCGTCCACGACTCAGCGCCATACAAGAATATT
GATAACACAAGGCAACGTAGTAGACGGATCTTGGTTGACATGGAGATATT
ATGACTGGACCAAATGTGTTTGAGTTTTGACAGTGCAAGGGTTGACTTAG
CAATCCTGACTTTCACCTCTTTGGCTGAACCACAGTCTTCTGTCTGGACA
GAGCCAAGGTAAGTGAACTCACTGACTTGTTCCAGTTCTGTACCTCTCAC
TGTGACTTGGGCTGTGGTGTCTGACGGCCCAGATACAAGGCACTTGGTCT
TCTCGAGGCTTATCTCCATACCATACCTCCTGCTTGTGGAGTCCAGGCTG
CTGGTCTGGAGTTGCTGATCCTCTTTCGAACCATCCAGCAAGTCTACATC
ATCAGCAAATTGAAGGTGAGTTATTATGCGTCCTGAAAGTTTGATGGGTG
ACACCTTTGGTGCTAGGGCTTCTCTCATAATGTTCTCCAGAAATATGTTG
CAGAGTGTAGGCGAGAGGAGACAACCCTGGCGAACTCCCACTGACGTAGG
GAAGCACTCACTGAACTCTCCCCCTGTCATGACCATGCTTTGNCTGGCGA
ACTCCCACTGACGTAGGGAAACACTCGCTGAACTCTCCCCCTGTCATGAC
CATACTTTGTGATGACTTGTACAGTGCTTCTATGGAGTTCACAATCCCCC
TGCTAATGTTGAACCGGCGCATCACTGCCCACAGACCGTCCTGCCATACT
CTGTCGAAGCACTTCTTGTAGTCAACGAAAGTGTGGTACACCGGTTTCCC
AAGCTCTCTGTACTTCTCACAGATCAGGCGAAGGTTGAAGATCTGTTCGG
CACAGGACCTGCCCTTCCTGAATCCAGCTTGCTCTTCAGAGAGTATCTGC
TCGGCCTGTGGCTGGAGCCGGTTTAAAATGACTTTCAGGAGAATCTTACT
TGGGTGTGAGAAAAGGCTTATGGTACGATAGTTCGAGCATTTCTTTAGGT
TGCCCTTCTTTGGAAGGGGGATAACTACGGAAGTTGTCCAGGCCTCGGGC
CACTTGCCAGTTTTGAATACATGGTTACAGATCCTTGTATACAGTCTGGC
AACTGTCTCTCCTCCTGCTTTGAGAAGTTCTCCTGGCACATTGTCTATAC
CAGGGGACTTTCCCAGTTTTAAGGCTTTGATTGCTGCTACAACCTCTGAC
TCAAGAATGTCTGGAGCGACATCTTCTTGCAGTTGACAGGTTGTTGACTT
TAGTTCTTCCAGCACCTCTTCTTCTGCTGTCAGTTGGTAGTTGTACAACT
CTTGACAGTAGGTCTTCCAGCGCCTTAAGATGTCTGGCTTTGTAGTTAGC
AAGTTGCCATCATCATCTTCAATGCATGTAGTCTGGTTACCTTTCTTCTG
GGAGAGTGACTTTATTGTGTTGAATGCCTGCTTTGTATTGTTGTTTCGTA
TTCCAGCTTCGACCCTCTTGCATTCTTGTTGTATCCACTCTTCCTTGGCA
ACCTTGATGGCCTGTTTTACTTCCCGGTTTGCTTTTTGGTATTCTCTGTT
TTTCTGTCGAGTTCTAAACCTGTCCCCTTTCTTTCTCCTTCTTTCGTCAC
ACTTTATTCACATTCTTAAAAATCTGATCTAAAATCGGTTGCCCATGCCC
CTTTCTGGTTCCTAAAAGAAGTCAATATATTGATGTTTCTTTTACTATAT
TTCCTTTCCATCATTTTAGGGATGGCAGAGTTAACATGTGTGCCTCCCGT
TAAAGAGCTTCATGTGGAACAAACTACGAACGAGACGCATATCAAAGAGG
AGACGGGAGACACGGGATGGCAACAGGATGAACAAGAGAACGTGCAGTGG
CAGGAAACGTACAATGAAGGCCAGGAAACCTACGACTACTTCGGTGCAAC
CCTACCAACCGGACATCCTTGGAACGAGACTTGCAACAGTTGGGAGCAGA
CAACAGACACGGAACGGCAGCAGGACGAGGAAAAGTTAGCCCCAAACGAC
GGAACGTGCGGTGTAAGAGCGGAAATGCGAAAGTCCAGCTGCAAGCTTCC
CACAGGAGAACTAGCTGTTGGTCATCCTGGGAAGGAGACGTACCGACCTG
GGAAGGAGAGTGATCATCCTGGACACCCTGGGAAGGAAATGGGTTGTACA
AAGGACCCTGGGAAGGAGAGTGACAGCAGGGAGACTCTAGCAACAGACAT
GGGCCTGCAGCAGGAAACGTGTGATGTGAATTTTCCCCAACCTGACTACA
ACCAAACCTCACAGCTACTGGGGAGCAAAGGCAACATGGGAAGGCATTTG
GTTAAACAGACTGGTGCGAAACCCTTCATGTGTGGGGAGTGTGGGTACAT
GACAGCAAACAAGCATCACCTATCCGAGCATATAAGAACCCATACAGGAG
AAAACCCCTACAAGTGTGATCAGTGCGACTATTCTTCGGCAAAGAAATGC
ACTTTGGACCGACATCAACTAAAACATACTGGAGAGAAGCCCTACACGTG
TTGGGAGTGCGGGTACAGGGCAACTCAAAAGACTCACTTAGTCCTACATA
TGAGAACTCATACAGGAGAGAAACCCTACAAGTGTGACCAGTGTGACTAT
TCTGCTGCACAGAAATCCACTTTGGACCAACATCTATCAAAACACACTGG
TGAGAAACCCTACATGTGTGGGGAGTGTGGGTACATGACGGCTCAGAGGT
CTCACTTATCCCAACACATGAAAACTCATACGGGAGAAAAACCCAACACA
TGTGTAGAGTGTGGGTACATGACGGCTCAGAGATCTAAGTTATCCCGACA
TATGAGAACCCATACAGGTGAAAAACCGTACAAATGTGACCAGTGTGACT
ATTCTACAGCATGGAAATCTAGTTTACGCAAACACAAAGCAACACACACT
GATTTGAAACCTTACGTGTGTGGGAAATGTGGGTTTAGGACAAAGCAAAG
GTATAANGACAAATCAAAGGTATAACTTATCACAACATATGAAGACCCAT
ACTGGTGACAAACCCTACAAATGTGACCAGTGTGACTATTCTGCTTTGAG
AAAACATCAGTTGGACTTCCATTTGGCAAAGCACAGTGGTGAGAAGCCCT
ACATATGCGGAGAGTGTAGTTTCNCCTACATGTGCGGAGAGTGTAGTTTC
AGGACAGCTCAAAAGTACCATCTATCCCGACACATGAGAATCCATACAGG
AGAAAAACCCTACACGTGTGACGAGTGCGACTTTTCTACTGGAGACAAAT
CCAATTTGGTACAGCATCGCCTAGCTAAACACGTTGGAGAGAAACCCTAC
TTGTGTGACCAGTGTGACTATTCTGCTGCACAGAAATCCACATTGGACCA
ACATCTAGCAAAACACACTGATGAGAAACCCTACATATGTGGAGAGTGTG
GGTACATGACGGCTGAGAGGAATAAGTTATCCCGACATTTGAGAACCCAT
ACAGGTGAAAAACCTTATAAATGTGACCAGTGCGACTTTTCTGCTGCAGA
GAAATCTGGTTTGCGCAAACACAGAGCAAAACACACTGGTTTTAAACCTT
ACGTGTGTGGGCAATGTGGGTTCAGGACAAATCAAAGGTATACCTTATCA
CAACATATGAAGACCCATACAGGTGAAAAACCCTACAAATGCGACCAGTG
TGACTATTCTGCTTTGAGAAAACATCAGTTGGACTTCCATTTGGCAAAGC
ATAGTGGTGAGAAGCCCTACAGGTGCGGGGAGTGCAGTTACAGGACAGCT
CAAAAGTACCATCTATCCCGACACATGAGGACCCATACAGGTGAAAAGCC
CTACAAGTGTGACCAGTGCGACTTTTCTACTGGTGACAAATCCAATTTGG
TACAGCATCGCCTAGCTAAACACACTGGATAGAAACCCTACATGTGTGGG
AAGTGCGGGCACAGGACAACTCGGAATAGAAGTCTTCCTTATCCTAATGT
GAGATTCTGCACAGGAGGAAAACCTTATATTTGGCATCTGTGCAACTACT
TTGCTTCTGTACTCTAGACATTTGAGAAGGCACGCGAAAAAAAGTCTGAT
TAATACGTGCGACAAATGTACAGCATACAACTTATGTACTTGTTATTTTG
TGTTAAAGTTGACCGTTTATTTGTTTTGACTTATAATGTAAAAATGTTCT
CACAGGATTGGATATTTTGTCATCTGTTTACTCACTTGTTTTAAATAATT
GTTGCGAAAGAATAACCTAACATTTGCAGCAAAAAGCATACTTTATACAC
TAGTATTCTCAGTGTTCAATTTTTATA Coding sequence (CDS) from alignment at Sc0000000:1077221..1082247+ >BlTCONS00000176 ID=BlTCONS00000176|Name=BlTCONS00000176|organism=Branchiostoma lanceolatum|type=CDS|length=1302bp|location=Sequence derived from alignment at Sc0000000:1077221..1082247+ (Branchiostoma lanceolatum)
GGAATTCCAGAAGGCGTGGACACCATTAGCCACTATATACCTATAGGGAT
GGCAGAGTTAACATGTGTGCCTCCCGTTAAAGAGCTTCATGTGGAACAAA
CTACGAACGAGACGCATATCAAAGAGGAGACGGGAGACACGGGATGGCAA
CAGGATGAACAAGAGAACGTGCAGTGGCAGGAAACGTACAATGAAGGCCA
GGAAACCTACGACTACTTCGGTGCAACCCTACCAACCGGACATCCTTGGA
ACGAGACTTGCAACAGTTGGGAGCAGACAACAGACACGGAACGGCAGCAG
GACGAGGAAAAGTTAGCCCCAAACGACGGAACGTGCGGTGTAAGAGCGGA
AATGCGAAAGTCCAGCTGCAAGCTTCCCACAGGAGAACTAGCTGTTGGTC
ATCCTGGGAAGGAGACGTACCGACCTGGGAAGGAGAGTGATCATCCTGGA
CACCCTGGGAAGGAAATGGGTTGTACAAAGGACCCTGGGAAGGAGAGTGA
CAGCAGGGAGACTCTAGCAACAGACATGGGCCTGCAGCAGGAAACGTGTG
ATGTGAATTTTCCCCAACCTGACTACAACCAAACCTCACAGCTACTGGGG
AGCAAAGGCAACATGGGAAGGCATTTGGTTAAACAGACTGGTGCGAAACC
CTTCATGTGTGGGGAGTGTGGGTACATGACAGCAAACAAGCATCACCTAT
CCGAGCATATAAGAACCCATACAGGAGAAAACCCCTACAAGTGTGATCAG
TGCGACTATTCTTCGGCAAAGAAATGCACTTTGGACCGACATCAACTAAA
ACATACTGGAGAGAAGCCCTACACGTGTTGGGAGTGCGGGTACAGGGCAA
CTCAAAAGACTCACTTAGTCCTACATATGAGAACTCATACAGGAGAGAAA
CCCTACAAGTGTGACCAGTGTGACTATTCTGCTGCACAGAAATCCACTTT
GGACCAACATCTATCAAAACACACTGGTGAGAAACCCTACATGTGTGGGG
AGTGTGGGTACATGACGGCTCAGAGGTCTCACTTATCCCAACACATGAAA
ACTCATACGGGAGAAAAACCCAACACATGTGTAGAGTGTGGGTACATGAC
GGCTCAGAGATCTAAGTTATCCCGACATATGAGAACCCATACAGGTGAAA
AACCGTACAAATGTGACCAGTGTGACTATTCTACAGCATGGAAATCTAGT
TTACGCAAACACAAAGCAACACACACTGATTTGAAACCTTACGTGTGTGG
GAAATGTGGGTTTAGGACAAAGCAAAGGTATAANGACAAATCAAAGGTAT
AA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00000176-exon-Sc0000000-1564993656:1077221..1077267 | BlTCONS00000176-exon-Sc0000000-1564993656:1077221..1077267 | Branchiostoma lanceolatum | exon |
| BlTCONS00000176-exon-Sc0000000-1564993656:1079690..1082247 | BlTCONS00000176-exon-Sc0000000-1564993656:1079690..1082247 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000000 | genome | Sc0000000:1077221..1082247 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF000079 |
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