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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000000:1058925..1062512+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00000166 ID=BlTCONS00000166|Name=BlTCONS00000166|organism=Branchiostoma lanceolatum|type=mRNA|length=3588bp|location=Sequence derived from alignment at Sc0000000:1058925..1062512+ (Branchiostoma lanceolatum)
ATTCACGGTTGGTTGAGTTTTATCTACTGCAGTAACGCAGATCCTACCAA
CAAACCCCGGATTGTCCTGATCGCCAGTCATGCTGACAAAATAAAAGACA
AGCAAGCAGGTAAGTTGGTACCATTTTGAAACCGTAATAACAATAAAAAG
AGACTGATGTGATAGATTTTACCTTCTTTCAAACTTTTTGAATGGAAAAA
AAGTATTTTTCCTTGAGCTTATCTATCCGACGGTGTTTGTTTCTCTGAAC
GGTCTGTCTTTCAATCTGGCTGTCTTTTTACGTCTCTCTCCCTTTTACCG
AGCTTGCAGTGTGACATCTCTAATCATCTTATTTGTGCCTGTAGGTCTTC
GCCGGGCCACAGCTCTGGTGGAATACTACACAGAATTGTTCCAAGAGTCC
CTGGTGGTGTCACAGGAGGTGTTCCTGATCAACTGCATGGAAGCGAGGTC
TTCTGGGATACACCGGCTGCGTGAAGTGCTGGCAGCATTCACGGAGGACA
TGTTGAAGGTACAGGTTATAGGGTTGCTTCGATCTTCTGTTAGTAATCAG
TAATGTAATTACAGCAACTATTATTGTATCACCTTCCTCTTATTTAAAAC
ATTTTTTAAGCTTTGTGGGATCTGCACAACTAAGGATGATATTCAATAGA
ACCATTTATGTGACCTATTTTGTTGCACACTAATAAAAGTGCACTTGGTC
TGTACACAGCAAAGACCACAGGTCCCAAAGGTTTGCATCCAGTTGTCGGA
GACCATTGAAGACTGGAAAGAGGAGAGGAAGTCGTTCCCAGTGATGGGGT
GGCAGGACTACCTGACAGCTGTCAGACAGGCAACTTCCTACCTTCACGAA
CGAATTTTACAACTGGCGTCATCTTACCTTCATGATGAGGGAGAGGTAAT
TGTGTCTTCTTGAAACCGGAGCATGCAATATTTTTTTTCCTTATAAGTGT
CCTTTTCAGTTGTTTAAAGAATAACATCTATTGGTGTCTTCAAAATTTTT
AGCTTTTCGATGTTAATTATTGTCAACATCAAAAAATTTGTTTAGACCCG
AACAAGATATCGGAAAAGTATCGTAGTGAATGAATTTTCCTCTTTATTTG
CTCCGTAATTACATTTAGATAATCTACCTTCGCCACGGAACCGACTCGAT
AACCGACTCAATGGTAGTGCTGGACCCCCAGTGGTTGTTCACATCGGTTT
TCGGATCCCTGCTCGCTCCGGACGACTTCCCTATCGACAAGGTGGTGAGG
ACTGCCGAGGACTACGTCACCCTTGAGGAACTTACCCGTGTCTTCAGTGC
CGTTGCCGACATCCCTCTGCTGATCAAACTCCTCCAGGACTTCCAGCTCT
GCCACACGTACGACGGTCGCACCTTCATCCTCCCCAGCCTGCTGCAGCAG
GAGATGGAAGAGGCGGCGTGGTCTCCTGTGTCCAGCAAGGCTGTCTACTT
CGGTCTGCAAATCCGGGGCCGCAAGGAGATCGACAGCTTCTCGTCTGACC
TGTTCCTTCGGCTGCAGACGCTGCTGATGCAGGCGCACCCAGACAAGCTC
AGCCGGCCTCTCCTGTGGAAGAACAGCGCCAAATGTACCGACGGGAAGGC
CGAAGCGCTACTGCAGATCACACAGGACAAGAGGCAGCTCAACATCTTCG
TCAGGAGCACGAAAGGCAACAGGGAGGACTGCAACTCCATCATGGACCTC
CTGAAGGACATGACGTACCGCCTGCTGCACGAGACCAGCCCAGGAGCCAG
GTCACGGGACATGGTGCTCAGCGCCCTGGACCTCCGGGAACACAGACCGC
AGCCTCACGCCTACAGCAGGGAAGAGGTGGAAGAAGCTGCGGAGGCGGGC
AGGGACGTCGTCCACCCTAAAAGAAACATTCCGGAAGACGTCACGGATCT
CCTGTTGAACCTCGGCAACCTGAAAGGTGAGTTTACTTACTAAATACACT
GGAAACCTAAAGATACAGACTCTGAATTTGTGGCAAACGCGAAAAAAAAC
AAATACAACATCTTGCGAAGCATACAACACAGCTTGTACCAACATTTCGG
CAATCATAAAATCTGGCATCAATATGTGCCTAGAATGTAAATCTACCAAT
TTTCGTTCTCGCTGCGGAATATTGGGGATGACAAAATGAATGACTGTATT
TTGTTGCCGTACGACAGGCATGCTGGGACGGGTAGCCCGGAAGAGGCCGG
AGCTGGTGGAGACTCTGCGTCACATCCACCCCATCCTGGACCGCCTCCGC
GCTGATGACGTCATCAACATGGAGGAGAACGACCGCATTCGGGCCGCCAG
GATTCCCCAGGATGCAGTGCGCGAGCTGCTGGACATTCTAGAGGCCAAAG
GAGAAAGTGCATGTGTCAAGTTTCACTCTGTCCTTACGAAATGTAATGAG
CATGCCGCAAGCCTACTTAAGGCGAGCCCGGTGTCTGAGGAGGGGGCCCG
GGCTAAATCAAGGTAGATCTTAGATTCTTTCGCAGTACTTTTCTTTTGTT
ACTCTTTGGGAGTAGTCTGTTGTTATTCTAAAGGAATGTATGATAAAAAC
ATGTAACTATCCTATACTGTTAGCTCCTAATGCCGTAATGAATGTTGTAT
TCAGGATGCCATAGTATTACATGATTCCATGAGCTTTTGAGCAGATTATG
GATTGATTACAATATATCTAATCATCCGACTGGACTTAAGCAAAGATTAG
TTCCAATGTTTGTACCATAAAGATGGGATTACTGATATGCTGCTAGCCTA
TTACAGGATAAACAAATGTCTAGGGAGGTAGGGGCAGCAGCTTAGACCTT
GGATTCCAATACTGTTATTGGCCTTACCCACAACGTTGAACATATTTTAT
TCGTGATGCCAATGTTTTCCATGATAAATCTAGGCTCTAGGCAACTAAAC
TCTGGCTAGTATAATTGAATATGTATCACTATGTGGACTACTACTACTTT
CACTATGTACCTTTGTTTAATTTTCATACTGGTATCTGATGAATTATGCA
TACAGCAGACATTTACAATTCCATTAGAGAATTCAAACGTAGATCAGAGT
ACACGCGCACGCACTCTGGCCAATCGTTTTAAAAGAGACATTTTGCATAA
AAGAGGCCTTTTAGTTTGTCAGTCATAGCTTAAATGTTTTCAATACATTA
ACAGAGTGCATGAGCTCATATGTACCTTTCTCTGTGCACTTAGACAAAGT
CATATGGAATCTTGTATTCTAGTTTATCATATAACATGTATATCATCACA
AGCTTTTCGGCCTAAACTACTTATGATAGGTGGCGATCAACAATCAGTGG
TGTACAATACAACTGTATAATTTTGATAAGAACATTAAATGACTTGTACA
TACAATTCAAATTACACTAGACAATATGTAGCTACAGAGCTGGATCAGAG
TATGCTATGGCACGCTGGTATTGCCATAAATATAGGATATGAGGTTATAT
TTTTTGGGCATTTACAACTTAGAAATCACTACCGCAACAAAATACACTAC
GAACATGGTAGGAATCAAACGACAGCAATACAAAAAATCTTCATCTGTCT
ATATTTTGGTCACTCAGCTGTCATTAGCTGAAAAGGGT Coding sequence (CDS) from alignment at Sc0000000:1058925..1062512+ >BlTCONS00000166 ID=BlTCONS00000166|Name=BlTCONS00000166|organism=Branchiostoma lanceolatum|type=CDS|length=1566bp|location=Sequence derived from alignment at Sc0000000:1058925..1062512+ (Branchiostoma lanceolatum)
ATTCACGGTTGGTTGAGTTTTATCTACTGCAGTAACGCAGATCCTACCAA
CAAACCCCGGATTGTCCTGATCGCCAGTCATGCTGACAAAATAAAAGACA
AGCAAGCAGGTCTTCGCCGGGCCACAGCTCTGGTGGAATACTACACAGAA
TTGTTCCAAGAGTCCCTGGTGGTGTCACAGGAGGTGTTCCTGATCAACTG
CATGGAAGCGAGGTCTTCTGGGATACACCGGCTGCGTGAAGTGCTGGCAG
CATTCACGGAGGACATGTTGAAGCAAAGACCACAGGTCCCAAAGGTTTGC
ATCCAGTTGTCGGAGACCATTGAAGACTGGAAAGAGGAGAGGAAGTCGTT
CCCAGTGATGGGGTGGCAGGACTACCTGACAGCTGTCAGACAGGCAACTT
CCTACCTTCACGAACGAATTTTACAACTGGCGTCATCTTACCTTCATGAT
GAGGGAGAGATAATCTACCTTCGCCACGGAACCGACTCGATAACCGACTC
AATGGTAGTGCTGGACCCCCAGTGGTTGTTCACATCGGTTTTCGGATCCC
TGCTCGCTCCGGACGACTTCCCTATCGACAAGGTGGTGAGGACTGCCGAG
GACTACGTCACCCTTGAGGAACTTACCCGTGTCTTCAGTGCCGTTGCCGA
CATCCCTCTGCTGATCAAACTCCTCCAGGACTTCCAGCTCTGCCACACGT
ACGACGGTCGCACCTTCATCCTCCCCAGCCTGCTGCAGCAGGAGATGGAA
GAGGCGGCGTGGTCTCCTGTGTCCAGCAAGGCTGTCTACTTCGGTCTGCA
AATCCGGGGCCGCAAGGAGATCGACAGCTTCTCGTCTGACCTGTTCCTTC
GGCTGCAGACGCTGCTGATGCAGGCGCACCCAGACAAGCTCAGCCGGCCT
CTCCTGTGGAAGAACAGCGCCAAATGTACCGACGGGAAGGCCGAAGCGCT
ACTGCAGATCACACAGGACAAGAGGCAGCTCAACATCTTCGTCAGGAGCA
CGAAAGGCAACAGGGAGGACTGCAACTCCATCATGGACCTCCTGAAGGAC
ATGACGTACCGCCTGCTGCACGAGACCAGCCCAGGAGCCAGGTCACGGGA
CATGGTGCTCAGCGCCCTGGACCTCCGGGAACACAGACCGCAGCCTCACG
CCTACAGCAGGGAAGAGGTGGAAGAAGCTGCGGAGGCGGGCAGGGACGTC
GTCCACCCTAAAAGAAACATTCCGGAAGACGTCACGGATCTCCTGTTGAA
CCTCGGCAACCTGAAAGGCATGCTGGGACGGGTAGCCCGGAAGAGGCCGG
AGCTGGTGGAGACTCTGCGTCACATCCACCCCATCCTGGACCGCCTCCGC
GCTGATGACGTCATCAACATGGAGGAGAACGACCGCATTCGGGCCGCCAG
GATTCCCCAGGATGCAGTGCGCGAGCTGCTGGACATTCTAGAGGCCAAAG
GAGAAAGTGCATGTGTCAAGTTTCACTCTGTCCTTACGAAATGTAATGAG
CATGCCGCAAGCCTACTTAAGGCGAGCCCGGTGTCTGAGGAGGGGGCCCG
GGCTAAATCAAGGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00000166-exon-Sc0000000-1564993656:1058925..1059033 | BlTCONS00000166-exon-Sc0000000-1564993656:1058925..1059033 | Branchiostoma lanceolatum | exon |
| BlTCONS00000166-exon-Sc0000000-1564993656:1059269..1059432 | BlTCONS00000166-exon-Sc0000000-1564993656:1059269..1059432 | Branchiostoma lanceolatum | exon |
| BlTCONS00000166-exon-Sc0000000-1564993656:1059634..1059819 | BlTCONS00000166-exon-Sc0000000-1564993656:1059634..1059819 | Branchiostoma lanceolatum | exon |
| BlTCONS00000166-exon-Sc0000000-1564993656:1060043..1060850 | BlTCONS00000166-exon-Sc0000000-1564993656:1060043..1060850 | Branchiostoma lanceolatum | exon |
| BlTCONS00000166-exon-Sc0000000-1564993656:1061092..1062512 | BlTCONS00000166-exon-Sc0000000-1564993656:1061092..1062512 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000000 | genome | Sc0000000:1058925..1062512 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF000087 |
|
