|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000000:1043190..1046070+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00000164 ID=BlTCONS00000164|Name=BlTCONS00000164|organism=Branchiostoma lanceolatum|type=mRNA|length=2881bp|location=Sequence derived from alignment at Sc0000000:1043190..1046070+ (Branchiostoma lanceolatum) CAAAGCTGAGCAAGTCCCGATTTACGTGTTGGGAAAAAACACACCAAAGA
AGCAGGTAAGGCTTATAAAAGTGCATCCAAGTATTCTGATACGGAGCGTA
AGAGTTTGAGATCATTTCTGTGGAAAGAGGATCACCGTAAGATGATAATT
TATAGTCATTTTCTCGATGTCAACATGCTAGAAATGATGGGGGAGGGGGG
CGAAGCCAAACATACGTGCGACCCTCGCCACCCATACTAACAGGTTTGTT
TTCGTCCTTTTTCGAAATATGTGACGTCAGCTTGGATCATATTAGCTTCC
AGGTCCCAATCACTATAATAATCCTTTGTCAGATCCAAAAGAAATATTTT
TTGTACTTAACGTTACATACCCTCTACCCCGTAGAGCAGGAATGGAAAAT
TCCATCAGTGAACATTCTACTGAAGAAATTTGTGTCGGACATCCTGGGAT
GGAGATGGAATGTATGGATCACCCTGGGAAGGAGAGTGACAGCAGGGAGA
CCCAGATAACAGACATGGGCCTACAGGAAACGTGTGATGTGAACTTTCCC
CAACCTGACGACAAATCAACCTCACAGGTACAGGAGAGCAGAGGCAATAT
GAGAAATATCCTGTCCCTTTACTCAGTCCAGGCTACGGGAATGCAGGCGG
TTAAACACACTGGCAAGAAACCCTACATGTGTAGGCAGTGTGGGTCAAGG
ACGCCTCGAAAGTGTGATTTATCCCGACATATGAGAACTGATACAGAAGA
ATTATCTCATAAAGCTCATTTGGAGGGGCATACAGCAACAAAACACACAG
GTGAGAAACCCTACATGTGTGAGTCGTGTGGGTACAGGACAGCGAAGAAG
GACCACTTATCCAGTCACATGAGAACCCACACAGGACAGAAACCCTACAA
GTGTGACCGGTGCGACTATTCTGCTGCACACAAAGCTGTTTTGGAGATAC
ATATAGCAACAAAACACACTGGCGAGAAACCCTACATGTGTGGAGAGTGT
GGGTATAGGACAGCTTATAGGGCTGCTTTGTATCAACACATGAGAACCCA
TACAGGAGAGAAACCCTACAAGTGTGACCTGTGCGACTATTCTGCAGCAC
AGAAATCCACTTTAGACCTACATCTAAGAAAACACACTGGTGAGAAACCC
TTCATGTGTGAAGAGTGTGGCTTCAGGGCAACTAAGAAGTCTTACTTATC
CCGACATATGAGAACCCATACTGGAGAAAAACCCTACAAATGTGACCAGT
GTGACTATTTTACAGCAAATAAAGATAACTTACGCCGACATATGAGAACC
CATACTGGAGAAAGACCCTACAAATGTGTCCAGTGTGACTATTCTGCAGC
AGAAAAGGGTACCTTATCCAGTCATATGAGAATGCATACAGGAGAAAGGC
CCTACAAGTGTGATCAGTGCGACTATTCTGCTGCACTGAAAGGTAACCTA
TCTCAACACGTGAGAAAACATACACGTCATTTGGAGGGGCATACAGCAAC
AAAACACACTGTCAAGAAACCCTACATGTGTGAGTCGTGTGGGTACAGGA
CAGCTAAGAAGGACCACTTATCCAGTCACATGAGAACCCACACAGGACAG
AAACCCTACAAGTGTGACCGGTGCGACTATTCTGCTGCACACAAAGCTGT
TTTGGAGATACAAATAGCAACAAAACACACTGGCGAGAAACCCTACATGT
GTGAAGAGTGTGGGTATAGGACAGCTTATAGGGCTGCCTTGTATCAACAC
ATGAGAACCCATACAGGAGAGAAACCCTTCAAGTGTGACCTGTGCGACTA
TTCTGCAGCACTGAAATCCACTTTAGACCAACATCTAAGGAAACACACTG
GTGAAAAACCCTTCATGTGTGAAGAGTGTGGCTTCAGGGCAACTAAGAAG
TCTTACTTATCCCGACATATGAGAACCCATACGGGAGAAAAACCCTACAA
ATGTGACCAGTGTGACTATTTTACAGCAAATAAAGATAACTTATGCCGAC
ATATGAGAACCCATACTGGAGAAAGACCCTACAAGTGTGGCCAGTGTGAC
TATTCTGCAGCGCAGAAATCGAATTTAGACAGACATCTTAGAAGCACCCA
TGAATGTATCGGTACAAGTGAACTGTCAAGCTAAACTAAGCAAGAAAGAC
CTACGGATTTATAAAAGAATGTGACTATTTTGCTGCACAAAATATCTTTA
GCAACAACAAGCATACCTTGTCCTAAACTATGTTTGAACCCTTCAACCTT
CTGTTTGTAGTAACTGTTTTGTAAGATCCAGGATACATGTACAGGCAGAT
GTACTGGTTAGTCTATGTAGAAGACATATGAGTGTTAAGCATCTTCACGG
ATTCCATGATTTATGATTTACACGTGAGGTATTTAGAAAATAACGTAAGT
CTCTCCAAGATTTGCCCAAGTAAAATGAGTGTAAACAAACCCAAATGTGT
TGGTTATGTTTTAAGATACTTGAATGTTGAAATGTTACATACTAGATTAA
TGCTTAACATTTGGAGGGAACGATACACAATAGGAGATACCAGCAGTTGA
CCCAGGAGTGGAATTTGGTCACATATATGTTGATGAATATATATGTGATG
GTTTTAGAGCTGAAGAAGAAATACCTTTTTTGTCAGAGTAATGAAAACAA
GCTCTTTCTAAATAAGTGATGAAGGGGCGGCAACTGTTCGTATTTTCGTG
CATTTTTCGTTATCAATAAGTCCACCGTTCTAAAGCTAGCGTTCTTTGTA
CCTGGCATGTACACATTGTAGCTGGGGCGCAGAGTTGTAGCTCGGGCGAC
CTTCGGAATTCTCGGGTATGGGGTTCAGAGGTTACGTAAAGTACGCCATA
AAACCACTCAAATAACACATGATATGCCAAC Coding sequence (CDS) from alignment at Sc0000000:1043190..1046070+ >BlTCONS00000164 ID=BlTCONS00000164|Name=BlTCONS00000164|organism=Branchiostoma lanceolatum|type=CDS|length=1743bp|location=Sequence derived from alignment at Sc0000000:1043190..1046070+ (Branchiostoma lanceolatum) ATGGAAAATTCCATCAGTGAACATTCTACTGAAGAAATTTGTGTCGGACA TCCTGGGATGGAGATGGAATGTATGGATCACCCTGGGAAGGAGAGTGACA GCAGGGAGACCCAGATAACAGACATGGGCCTACAGGAAACGTGTGATGTG AACTTTCCCCAACCTGACGACAAATCAACCTCACAGGTACAGGAGAGCAG AGGCAATATGAGAAATATCCTGTCCCTTTACTCAGTCCAGGCTACGGGAA TGCAGGCGGTTAAACACACTGGCAAGAAACCCTACATGTGTAGGCAGTGT GGGTCAAGGACGCCTCGAAAGTGTGATTTATCCCGACATATGAGAACTGA TACAGAAGAATTATCTCATAAAGCTCATTTGGAGGGGCATACAGCAACAA AACACACAGGTGAGAAACCCTACATGTGTGAGTCGTGTGGGTACAGGACA GCGAAGAAGGACCACTTATCCAGTCACATGAGAACCCACACAGGACAGAA ACCCTACAAGTGTGACCGGTGCGACTATTCTGCTGCACACAAAGCTGTTT TGGAGATACATATAGCAACAAAACACACTGGCGAGAAACCCTACATGTGT GGAGAGTGTGGGTATAGGACAGCTTATAGGGCTGCTTTGTATCAACACAT GAGAACCCATACAGGAGAGAAACCCTACAAGTGTGACCTGTGCGACTATT CTGCAGCACAGAAATCCACTTTAGACCTACATCTAAGAAAACACACTGGT GAGAAACCCTTCATGTGTGAAGAGTGTGGCTTCAGGGCAACTAAGAAGTC TTACTTATCCCGACATATGAGAACCCATACTGGAGAAAAACCCTACAAAT GTGACCAGTGTGACTATTTTACAGCAAATAAAGATAACTTACGCCGACAT ATGAGAACCCATACTGGAGAAAGACCCTACAAATGTGTCCAGTGTGACTA TTCTGCAGCAGAAAAGGGTACCTTATCCAGTCATATGAGAATGCATACAG GAGAAAGGCCCTACAAGTGTGATCAGTGCGACTATTCTGCTGCACTGAAA GGTAACCTATCTCAACACGTGAGAAAACATACACGTCATTTGGAGGGGCA TACAGCAACAAAACACACTGTCAAGAAACCCTACATGTGTGAGTCGTGTG GGTACAGGACAGCTAAGAAGGACCACTTATCCAGTCACATGAGAACCCAC ACAGGACAGAAACCCTACAAGTGTGACCGGTGCGACTATTCTGCTGCACA CAAAGCTGTTTTGGAGATACAAATAGCAACAAAACACACTGGCGAGAAAC CCTACATGTGTGAAGAGTGTGGGTATAGGACAGCTTATAGGGCTGCCTTG TATCAACACATGAGAACCCATACAGGAGAGAAACCCTTCAAGTGTGACCT GTGCGACTATTCTGCAGCACTGAAATCCACTTTAGACCAACATCTAAGGA AACACACTGGTGAAAAACCCTTCATGTGTGAAGAGTGTGGCTTCAGGGCA ACTAAGAAGTCTTACTTATCCCGACATATGAGAACCCATACGGGAGAAAA ACCCTACAAATGTGACCAGTGTGACTATTTTACAGCAAATAAAGATAACT TATGCCGACATATGAGAACCCATACTGGAGAAAGACCCTACAAGTGTGGC CAGTGTGACTATTCTGCAGCGCAGAAATCGAATTTAGACAGACATCTTAG AAGCACCCATGAATGTATCGGTACAAGTGAACTGTCAAGCTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
BlTCONS00000164-exon-Sc0000000-1564993656:1043190..1043244 | BlTCONS00000164-exon-Sc0000000-1564993656:1043190..1043244 | Branchiostoma lanceolatum | exon |
BlTCONS00000164-exon-Sc0000000-1564993656:1043579..1046070 | BlTCONS00000164-exon-Sc0000000-1564993656:1043579..1046070 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000000 | genome | Sc0000000:1043190..1046070 + |
Properties
Property Name | Value |
GeneID | BlCUFF000085 |
|