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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000000:1042969..1046070+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00000162 ID=BlTCONS00000162|Name=BlTCONS00000162|organism=Branchiostoma lanceolatum|type=mRNA|length=3102bp|location=Sequence derived from alignment at Sc0000000:1042969..1046070+ (Branchiostoma lanceolatum)
TCAAGGTCAAAACTTTGCAATATGTATCCACGAACGCGGAGGAACTTACT
TTCGAAGATTTAAGATTATTGATGAGTTTTATTCTATTTCTACTGTAGGA
AATATTTGGAACGTTCTAACGTGTTGGTGGCAGGAACATACATTATTTGG
AAAATTAGGTTATCAAATTCACCTTTGACCCACATTGCGGTCACCTCTGA
CCCATTGATACGGCGGAAGGACAAAGCTGAGCAAGTCCCGATTTACGTGT
TGGGAAAAAACACACCAAAGAAGCAGGTAAGGCTTATAAAAGTGCATCCA
AGTATTCTGATACGGAGCGTAAGAGTTTGAGATCATTTCTGTGGAAAGAG
GATCACCGTAAGATGATAATTTATAGTCATTTTCTCGATGTCAACATGCT
AGAAATGATGGGGGAGGGGGGCGAAGCCAAACATACGTGCGACCCTCGCC
ACCCATACTAACAGGTTTGTTTTCGTCCTTTTTCGAAATATGTGACGTCA
GCTTGGATCATATTAGCTTCCAGGTCCCAATCACTATAATAATCCTTTGT
CAGATCCAAAAGAAATATTTTTTGTACTTAACGTTACATACCCTCTACCC
CGTAGAGCAGGAATGGAAAATTCCATCAGTGAACATTCTACTGAAGAAAT
TTGTGTCGGACATCCTGGGATGGAGATGGAATGTATGGATCACCCTGGGA
AGGAGAGTGACAGCAGGGAGACCCAGATAACAGACATGGGCCTACAGGAA
ACGTGTGATGTGAACTTTCCCCAACCTGACGACAAATCAACCTCACAGGT
ACAGGAGAGCAGAGGCAATATGAGAAATATCCTGTCCCTTTACTCAGTCC
AGGCTACGGGAATGCAGGCGGTTAAACACACTGGCAAGAAACCCTACATG
TGTAGGCAGTGTGGGTCAAGGACGCCTCGAAAGTGTGATTTATCCCGACA
TATGAGAACTGATACAGAAGAATTATCTCATAAAGCTCATTTGGAGGGGC
ATACAGCAACAAAACACACAGGTGAGAAACCCTACATGTGTGAGTCGTGT
GGGTACAGGACAGCGAAGAAGGACCACTTATCCAGTCACATGAGAACCCA
CACAGGACAGAAACCCTACAAGTGTGACCGGTGCGACTATTCTGCTGCAC
ACAAAGCTGTTTTGGAGATACATATAGCAACAAAACACACTGGCGAGAAA
CCCTACATGTGTGGAGAGTGTGGGTATAGGACAGCTTATAGGGCTGCTTT
GTATCAACACATGAGAACCCATACAGGAGAGAAACCCTACAAGTGTGACC
TGTGCGACTATTCTGCAGCACAGAAATCCACTTTAGACCTACATCTAAGA
AAACACACTGGTGAGAAACCCTTCATGTGTGAAGAGTGTGGCTTCAGGGC
AACTAAGAAGTCTTACTTATCCCGACATATGAGAACCCATACTGGAGAAA
AACCCTACAAATGTGACCAGTGTGACTATTTTACAGCAAATAAAGATAAC
TTACGCCGACATATGAGAACCCATACTGGAGAAAGACCCTACAAATGTGT
CCAGTGTGACTATTCTGCAGCAGAAAAGGGTACCTTATCCAGTCATATGA
GAATGCATACAGGAGAAAGGCCCTACAAGTGTGATCAGTGCGACTATTCT
GCTGCACTGAAAGGTAACCTATCTCAACACGTGAGAAAACATACACGTCA
TTTGGAGGGGCATACAGCAACAAAACACACTGTCAAGAAACCCTACATGT
GTGAGTCGTGTGGGTACAGGACAGCTAAGAAGGACCACTTATCCAGTCAC
ATGAGAACCCACACAGGACAGAAACCCTACAAGTGTGACCGGTGCGACTA
TTCTGCTGCACACAAAGCTGTTTTGGAGATACAAATAGCAACAAAACACA
CTGGCGAGAAACCCTACATGTGTGAAGAGTGTGGGTATAGGACAGCTTAT
AGGGCTGCCTTGTATCAACACATGAGAACCCATACAGGAGAGAAACCCTT
CAAGTGTGACCTGTGCGACTATTCTGCAGCACTGAAATCCACTTTAGACC
AACATCTAAGGAAACACACTGGTGAAAAACCCTTCATGTGTGAAGAGTGT
GGCTTCAGGGCAACTAAGAAGTCTTACTTATCCCGACATATGAGAACCCA
TACGGGAGAAAAACCCTACAAATGTGACCAGTGTGACTATTTTACAGCAA
ATAAAGATAACTTATGCCGACATATGAGAACCCATACTGGAGAAAGACCC
TACAAGTGTGGCCAGTGTGACTATTCTGCAGCGCAGAAATCGAATTTAGA
CAGACATCTTAGAAGCACCCATGAATGTATCGGTACAAGTGAACTGTCAA
GCTAAACTAAGCAAGAAAGACCTACGGATTTATAAAAGAATGTGACTATT
TTGCTGCACAAAATATCTTTAGCAACAACAAGCATACCTTGTCCTAAACT
ATGTTTGAACCCTTCAACCTTCTGTTTGTAGTAACTGTTTTGTAAGATCC
AGGATACATGTACAGGCAGATGTACTGGTTAGTCTATGTAGAAGACATAT
GAGTGTTAAGCATCTTCACGGATTCCATGATTTATGATTTACACGTGAGG
TATTTAGAAAATAACGTAAGTCTCTCCAAGATTTGCCCAAGTAAAATGAG
TGTAAACAAACCCAAATGTGTTGGTTATGTTTTAAGATACTTGAATGTTG
AAATGTTACATACTAGATTAATGCTTAACATTTGGAGGGAACGATACACA
ATAGGAGATACCAGCAGTTGACCCAGGAGTGGAATTTGGTCACATATATG
TTGATGAATATATATGTGATGGTTTTAGAGCTGAAGAAGAAATACCTTTT
TTGTCAGAGTAATGAAAACAAGCTCTTTCTAAATAAGTGATGAAGGGGCG
GCAACTGTTCGTATTTTCGTGCATTTTTCGTTATCAATAAGTCCACCGTT
CTAAAGCTAGCGTTCTTTGTACCTGGCATGTACACATTGTAGCTGGGGCG
CAGAGTTGTAGCTCGGGCGACCTTCGGAATTCTCGGGTATGGGGTTCAGA
GGTTACGTAAAGTACGCCATAAAACCACTCAAATAACACATGATATGCCA
AC Coding sequence (CDS) from alignment at Sc0000000:1042969..1046070+ >BlTCONS00000162 ID=BlTCONS00000162|Name=BlTCONS00000162|organism=Branchiostoma lanceolatum|type=CDS|length=1743bp|location=Sequence derived from alignment at Sc0000000:1042969..1046070+ (Branchiostoma lanceolatum)
ATGGAAAATTCCATCAGTGAACATTCTACTGAAGAAATTTGTGTCGGACA
TCCTGGGATGGAGATGGAATGTATGGATCACCCTGGGAAGGAGAGTGACA
GCAGGGAGACCCAGATAACAGACATGGGCCTACAGGAAACGTGTGATGTG
AACTTTCCCCAACCTGACGACAAATCAACCTCACAGGTACAGGAGAGCAG
AGGCAATATGAGAAATATCCTGTCCCTTTACTCAGTCCAGGCTACGGGAA
TGCAGGCGGTTAAACACACTGGCAAGAAACCCTACATGTGTAGGCAGTGT
GGGTCAAGGACGCCTCGAAAGTGTGATTTATCCCGACATATGAGAACTGA
TACAGAAGAATTATCTCATAAAGCTCATTTGGAGGGGCATACAGCAACAA
AACACACAGGTGAGAAACCCTACATGTGTGAGTCGTGTGGGTACAGGACA
GCGAAGAAGGACCACTTATCCAGTCACATGAGAACCCACACAGGACAGAA
ACCCTACAAGTGTGACCGGTGCGACTATTCTGCTGCACACAAAGCTGTTT
TGGAGATACATATAGCAACAAAACACACTGGCGAGAAACCCTACATGTGT
GGAGAGTGTGGGTATAGGACAGCTTATAGGGCTGCTTTGTATCAACACAT
GAGAACCCATACAGGAGAGAAACCCTACAAGTGTGACCTGTGCGACTATT
CTGCAGCACAGAAATCCACTTTAGACCTACATCTAAGAAAACACACTGGT
GAGAAACCCTTCATGTGTGAAGAGTGTGGCTTCAGGGCAACTAAGAAGTC
TTACTTATCCCGACATATGAGAACCCATACTGGAGAAAAACCCTACAAAT
GTGACCAGTGTGACTATTTTACAGCAAATAAAGATAACTTACGCCGACAT
ATGAGAACCCATACTGGAGAAAGACCCTACAAATGTGTCCAGTGTGACTA
TTCTGCAGCAGAAAAGGGTACCTTATCCAGTCATATGAGAATGCATACAG
GAGAAAGGCCCTACAAGTGTGATCAGTGCGACTATTCTGCTGCACTGAAA
GGTAACCTATCTCAACACGTGAGAAAACATACACGTCATTTGGAGGGGCA
TACAGCAACAAAACACACTGTCAAGAAACCCTACATGTGTGAGTCGTGTG
GGTACAGGACAGCTAAGAAGGACCACTTATCCAGTCACATGAGAACCCAC
ACAGGACAGAAACCCTACAAGTGTGACCGGTGCGACTATTCTGCTGCACA
CAAAGCTGTTTTGGAGATACAAATAGCAACAAAACACACTGGCGAGAAAC
CCTACATGTGTGAAGAGTGTGGGTATAGGACAGCTTATAGGGCTGCCTTG
TATCAACACATGAGAACCCATACAGGAGAGAAACCCTTCAAGTGTGACCT
GTGCGACTATTCTGCAGCACTGAAATCCACTTTAGACCAACATCTAAGGA
AACACACTGGTGAAAAACCCTTCATGTGTGAAGAGTGTGGCTTCAGGGCA
ACTAAGAAGTCTTACTTATCCCGACATATGAGAACCCATACGGGAGAAAA
ACCCTACAAATGTGACCAGTGTGACTATTTTACAGCAAATAAAGATAACT
TATGCCGACATATGAGAACCCATACTGGAGAAAGACCCTACAAGTGTGGC
CAGTGTGACTATTCTGCAGCGCAGAAATCGAATTTAGACAGACATCTTAG
AAGCACCCATGAATGTATCGGTACAAGTGAACTGTCAAGCTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00000162-exon-Sc0000000-1564993656:1042969..1043244 | BlTCONS00000162-exon-Sc0000000-1564993656:1042969..1043244 | Branchiostoma lanceolatum | exon |
| BlTCONS00000162-exon-Sc0000000-1564993656:1043574..1046070 | BlTCONS00000162-exon-Sc0000000-1564993656:1043574..1046070 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000000 | genome | Sc0000000:1042969..1046070 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF000085 |
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