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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000000:1039070..1041854+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00000161 ID=BlTCONS00000161|Name=BlTCONS00000161|organism=Branchiostoma lanceolatum|type=mRNA|length=2785bp|location=Sequence derived from alignment at Sc0000000:1039070..1041854+ (Branchiostoma lanceolatum)
CGTCGGTGAGCTGACGTCCGCCATTTTGATTTTTCGTCATCGGTTTCATC
TGCGAACAGACACGATTTTACGGAGTTCCAGAAGTCGTGGAGACCGCTAG
ACAACATAGACCTACAGGTAAGACCTTAGGTTGTCTTTGATGCTTCTTTG
TTTGTGCTTTTTTAAGCGGTGAATTAGAATTAGAAGTGTTCTTGTGGTCG
ATAGTTAATGTGGAGGGGGGCAGCTGTAACATCAAATTTTGATGTTACAG
CTGCCCTTTGTCGACTCGATTCGTATCTTCAGTGTTCCATTTGAAATCAT
GAACTATGTTGTTATATCCTCCTGGAAATATGGTAGACTTGTTTCTGAAA
AAAGTCTCAAGCTAAAAAGGGTCCATTATTTCAAATAGTAATGTAAAATC
CGATTCCCGTGCCCTGTTCTGGCTCCTGAGAGAAGTGAAACATTGATATT
TCCCTTCCCTATAATTTTTTTCCATCATATTAGAGATGGCGGAGTTAAAA
TGTGGGCCTCCCATTAAAGAGCTGCATACGGAACAATTTGCGAACGAGAC
ACACACCATTTGGACATAATAATTAATGCAAAATCCGTTTCCCGTGCCAA
TTTTTCTTGTTACTAACAGAAGAAAATATATCTTCCTCTTCCCTTTCCAT
AATTTTAGATATGGCAGAGGTAAACGGTGGAACTCCCGTTAAAGAGCTTC
ATGCGGAACAAACTACAAATGACGAAAAGGAGGAGACAGGAGACAGTGGA
TGGCAACAGACGCACATCAAAGAGGAGGAGACGGGAGACACTGCATGGCA
ACAGACGCATAGAAAAGAGGAGGAGACGGGAGACACGGGATGGCAACATG
CGCACATCAAAGAGGAAACGAGAGACACTGCATGGCAACAGACGCACATC
AAAGAGGAGGAGACAGGAGCCAGTGGATGGCAACAGGATGGACAAGAAAA
CGTTGGTGAGGACCAGGAAACCTACGACTACTTCGGTACAACCCAACCAA
CCGGACATCCGTGTGACGAGACTTACAACAGTTGGGAGCAGACAACAGAC
ACGGGCCTGCAGCAGGAAACGTGTGATCTGAACTTTCCCCAACCTGACAA
CAAATCAACCTTAAAGGTACAGAAGAGCAAAGACAATATAACAAGGCGTG
TGGTTAAACACACTAGTGAGAAACCCTACAAGTGTGGCGAGTGTGGGTAC
AGGACAGCTAAGAGGGCTGACTTAGCTAAACATATGAGAAATCATACAGG
TGAGAAACTCTACAAGTGTGGGGAATGTGGGTACCGGGCAGCAAGCAATG
GCCACCTATTCGAGCATATGAGGACCCACACAGGAGAAAAACCCTACAAA
TGTGGGAAGTGTGGGTTCAGGACAGCTCAAAGGTCTAACTTATCACAACA
TATGAAGACCCATACAGGAGAAAAGCCTTTCAAATGTGACCAGTGTGACT
ATTCTGCATGCCGGAAATCCACCTTACAGCAACACCTTTCCAAACACACA
GGCGAAAAACCCTATAAGTGTGGGGAGTGTGGCTACAGGGCAGCTCAAAA
ACACCAATTATCCCGACATATGAGAACTCATACAGGAGAAAAACCCTACA
AATGTGACCAGTGCGACTATTCTGCAGCATCGAAATGCACTTTGGACAAA
CATCTTAGAAAACATATGAGAAACCATACAGTTGAGAAACCCTACAAGTG
TGGGGAATGTGGGTACCGGTCAGCAAGCAATGGCCACCTATCCGAGCATA
TGAGGACCCACACAGGAGAAAAACCTTACAAATGTGACCATTGTGACTAT
TCCGCCGCACGGAAATCCACATTAGATTTGCACTGTACAAAACACACGGG
TGAGAAACCATACATATGTGGCGAGTGTGGGTACAGCACAGCAAGTAAGT
CCCATCTTTCAAAGCATATGAAAATACATACAGGAGAAAAACCCTACAAG
TGTGACCAGTGCGACTATTCTGCTGCAGTGAAATCATCTTTGGACAAACA
TCTCAGTAAGCACACAGGTGAGAAACCCTACACGTGTGGGAAGTGTGGGT
TCAGGACAGCTCAAAGGTCTAACTTATCACAACATATAAAAACCCATACA
GGAGAAAAACCCTTCAAATGTGACCAGTGCGACTATTCTACGTGCCGAAA
AGCCAACTTAGATCAACACCTTACCAAACACACAGGTGAGAAACCCTACA
TGTGTGGGGAATGTGGCTACAGGGCAACTCTAAAACACCAATTATCCCGA
CATATGAGAACCCACACAGGAGAAAAACCCTACAAATGTGACCAGTGCGA
CTATTCTGCAGCATCTAAATCCACTTTGGACATACATCTAACAATACACA
CTGGTAACAAACCCTACATGTGCGGAGAGTGTAGTTACAGGACAGCTCAA
AAGACCCACTTTTCCCGACATATGAGAACCCATACAGGAGAGAAACCCTA
CAAGTGTGACCAGTGCGACTATTCTGCAGCATCGAAATGCACTTTGGACA
AACATCTTAGAAAACATGTTCAGAAACCAGCAGAATGTGATAGTAATGTG
GGTAAAGAATAGCTGAAATGTCGAACTTAGAATAGGAGAGCTGAAAAAAC
AAAAGTAGTCAGCTATACCATTTTGCATAGGTATATGATGTATGTATATT
TGTAACGTTTTCTTCTTAGTATCATGTTGTAACATACAAGATACTGATAG
AACATACGAGATACTAAAGCAGCATGTTAGTCCACACTGTGCCTTGTTGA
AATTCATGTTTCAAAATGATCATTAAATGTTTAAG Coding sequence (CDS) from alignment at Sc0000000:1039070..1041854+ >BlTCONS00000161 ID=BlTCONS00000161|Name=BlTCONS00000161|organism=Branchiostoma lanceolatum|type=CDS|length=1902bp|location=Sequence derived from alignment at Sc0000000:1039070..1041854+ (Branchiostoma lanceolatum)
ATGGCAGAGGTAAACGGTGGAACTCCCGTTAAAGAGCTTCATGCGGAACA
AACTACAAATGACGAAAAGGAGGAGACAGGAGACAGTGGATGGCAACAGA
CGCACATCAAAGAGGAGGAGACGGGAGACACTGCATGGCAACAGACGCAT
AGAAAAGAGGAGGAGACGGGAGACACGGGATGGCAACATGCGCACATCAA
AGAGGAAACGAGAGACACTGCATGGCAACAGACGCACATCAAAGAGGAGG
AGACAGGAGCCAGTGGATGGCAACAGGATGGACAAGAAAACGTTGGTGAG
GACCAGGAAACCTACGACTACTTCGGTACAACCCAACCAACCGGACATCC
GTGTGACGAGACTTACAACAGTTGGGAGCAGACAACAGACACGGGCCTGC
AGCAGGAAACGTGTGATCTGAACTTTCCCCAACCTGACAACAAATCAACC
TTAAAGGTACAGAAGAGCAAAGACAATATAACAAGGCGTGTGGTTAAACA
CACTAGTGAGAAACCCTACAAGTGTGGCGAGTGTGGGTACAGGACAGCTA
AGAGGGCTGACTTAGCTAAACATATGAGAAATCATACAGGTGAGAAACTC
TACAAGTGTGGGGAATGTGGGTACCGGGCAGCAAGCAATGGCCACCTATT
CGAGCATATGAGGACCCACACAGGAGAAAAACCCTACAAATGTGGGAAGT
GTGGGTTCAGGACAGCTCAAAGGTCTAACTTATCACAACATATGAAGACC
CATACAGGAGAAAAGCCTTTCAAATGTGACCAGTGTGACTATTCTGCATG
CCGGAAATCCACCTTACAGCAACACCTTTCCAAACACACAGGCGAAAAAC
CCTATAAGTGTGGGGAGTGTGGCTACAGGGCAGCTCAAAAACACCAATTA
TCCCGACATATGAGAACTCATACAGGAGAAAAACCCTACAAATGTGACCA
GTGCGACTATTCTGCAGCATCGAAATGCACTTTGGACAAACATCTTAGAA
AACATATGAGAAACCATACAGTTGAGAAACCCTACAAGTGTGGGGAATGT
GGGTACCGGTCAGCAAGCAATGGCCACCTATCCGAGCATATGAGGACCCA
CACAGGAGAAAAACCTTACAAATGTGACCATTGTGACTATTCCGCCGCAC
GGAAATCCACATTAGATTTGCACTGTACAAAACACACGGGTGAGAAACCA
TACATATGTGGCGAGTGTGGGTACAGCACAGCAAGTAAGTCCCATCTTTC
AAAGCATATGAAAATACATACAGGAGAAAAACCCTACAAGTGTGACCAGT
GCGACTATTCTGCTGCAGTGAAATCATCTTTGGACAAACATCTCAGTAAG
CACACAGGTGAGAAACCCTACACGTGTGGGAAGTGTGGGTTCAGGACAGC
TCAAAGGTCTAACTTATCACAACATATAAAAACCCATACAGGAGAAAAAC
CCTTCAAATGTGACCAGTGCGACTATTCTACGTGCCGAAAAGCCAACTTA
GATCAACACCTTACCAAACACACAGGTGAGAAACCCTACATGTGTGGGGA
ATGTGGCTACAGGGCAACTCTAAAACACCAATTATCCCGACATATGAGAA
CCCACACAGGAGAAAAACCCTACAAATGTGACCAGTGCGACTATTCTGCA
GCATCTAAATCCACTTTGGACATACATCTAACAATACACACTGGTAACAA
ACCCTACATGTGCGGAGAGTGTAGTTACAGGACAGCTCAAAAGACCCACT
TTTCCCGACATATGAGAACCCATACAGGAGAGAAACCCTACAAGTGTGAC
CAGTGCGACTATTCTGCAGCATCGAAATGCACTTTGGACAAACATCTTAG
AAAACATGTTCAGAAACCAGCAGAATGTGATAGTAATGTGGGTAAAGAAT
AG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00000161-exon-Sc0000000-1564993656:1039070..1039186 | BlTCONS00000161-exon-Sc0000000-1564993656:1039070..1039186 | Branchiostoma lanceolatum | exon |
| BlTCONS00000161-exon-Sc0000000-1564993656:1039728..1041854 | BlTCONS00000161-exon-Sc0000000-1564993656:1039728..1041854 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000000 | genome | Sc0000000:1039070..1041854 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF000082 |
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