BlTCONS00000158 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00000158
Unique NameBlTCONS00000158
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000000:1028165..1029840+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00000158 ID=BlTCONS00000158|Name=BlTCONS00000158|organism=Branchiostoma lanceolatum|type=mRNA|length=1676bp|location=Sequence derived from alignment at Sc0000000:1028165..1029840+ (Branchiostoma lanceolatum)
AAGAGGAGGAGACGGGAGACACTGGATGGCAACAGACGCACATCAAAGAG GAGGAGACGGGAGACACTGGATGGCAACAGGATGGACAACAGAACGCGCA GTACCAGGAAACATACGGCGAAGACCAGGAAACCTTCGACTACTTCTACA GCGCAACCATACCTACCGGGCATCCTTGGATTGAGACTTGTAACAGTTGG GAGCAGCCAGCAGGCACGGGACGGCAGCAGGACGAGGAAAGGTTAGTTCC AATCGACGAAACGTGCGGTGTAAGAGCAGAAATGGAAGAGTCCAGCTGTG AGGTTTCTACTGGAGAACTGTGTGCTGGACATCCCGGGATGGAGATATAC CATCATGGACACACTGGGAAGGAGAGTGAAGGCAGGGAGACTCTGACAAC AGACATGGGCCTACAGGAAACGTGTGATGTGAACTTTCCCCAACCTGACA ACAAATCAACCTCACAGGTACAGGACAGCAAAGGCATTATGCAATGGCAT GTGGTTAAACAGACTGAGGAAAAGCGCTACATGTGTGGGAAGTGCGGGTA CCGAACGGCTCATAGGACTGCCTTATCCAGACATATGAGAACCCATACAG GAGAAAAACCCTACAAGTGTGACCTGTGTTACTATTCTGCCGCACGGAAA TCCAACTTAGACAACCATAAAGCAACACACACCGGTGAGAAACCCTACAT GTGTGGAGAATGTGGGTACAGGACGGTTAAGAGGACTGACTTAGCTAAAC ATATGAGAACCCATACAGGAGAAAAACCCTACAAGTGTGACCAGTGCGAC TATTCTGCTGTGCAAAAATCCTCTTTGGACCACCATCTTGCAAAACACAC TGGCGAGAAACCCTACGTGTGTGGGGAGTGTGGGTACAGGACTTCAAAAA AGTCTCACCTATCCCAGCATATGAGGACCCATGCAGGAGATAAACCCTAC AAGTGTGACCAGTGTGATTATTCGGCAGCGAGTAAACCACAGTTAAACTC ACATCTAATGAAACACACTGGTGAGCAACCCTACCTGTGTGGGAAGTGTG GGTTTGGGACAGATCGTAAGTCCCGCCTATCCGAGCATATGAGAACCCAT ACAGGAGAAAGACCCTACAAGTGTGACCAGTGTGACTATTCTGCTGCACA GAAATCTACATTAGACAGACATCGAGCCCAGCACACCGGCGAGAAACCCT ACATGTGTGGGGAGTGTGGATACAGGGCAACACAAAAGTCTGCATTATCC CAACATATGAGAACCCATACAGGAGAAAAATCTCACGTGTGTTGGGAGTG TGGTTACAGGGCATATCGAAAGTCGGACCTATCCAAACACATGAGAAAAC ATACCGGCGAAAGACCCTACAAGTGCGATCATTGTGACTATTCTGCAGCA GATAAATCAACTTTAGTTAAACATCAAAGAATGCACACTGGTTTAAACCC TACATGTGTGGGGATTGAGGGTACAGGGCATTTGGAAGGTTTGACTTATC CCTACATATGAAAACCCACACAGGAGAAAAGCCTTTGAAGTGCGACCAGT GAGACTATTATGCAGAACAGAAATACGCTTTGGTCAAGCATCTTACAAAG CACACCGATGTGAAACGCTACTTTTGTAGGGAGCGTGGGTACAAGGTAGC TAACAGATCGACCTCATCGCAACATA

Coding sequence (CDS) from alignment at Sc0000000:1028165..1029840+

>BlTCONS00000158 ID=BlTCONS00000158|Name=BlTCONS00000158|organism=Branchiostoma lanceolatum|type=CDS|length=1509bp|location=Sequence derived from alignment at Sc0000000:1028165..1029840+ (Branchiostoma lanceolatum)
GAGGAGGAGACGGGAGACACTGGATGGCAACAGACGCACATCAAAGAGGA
GGAGACGGGAGACACTGGATGGCAACAGGATGGACAACAGAACGCGCAGT
ACCAGGAAACATACGGCGAAGACCAGGAAACCTTCGACTACTTCTACAGC
GCAACCATACCTACCGGGCATCCTTGGATTGAGACTTGTAACAGTTGGGA
GCAGCCAGCAGGCACGGGACGGCAGCAGGACGAGGAAAGGTTAGTTCCAA
TCGACGAAACGTGCGGTGTAAGAGCAGAAATGGAAGAGTCCAGCTGTGAG
GTTTCTACTGGAGAACTGTGTGCTGGACATCCCGGGATGGAGATATACCA
TCATGGACACACTGGGAAGGAGAGTGAAGGCAGGGAGACTCTGACAACAG
ACATGGGCCTACAGGAAACGTGTGATGTGAACTTTCCCCAACCTGACAAC
AAATCAACCTCACAGGTACAGGACAGCAAAGGCATTATGCAATGGCATGT
GGTTAAACAGACTGAGGAAAAGCGCTACATGTGTGGGAAGTGCGGGTACC
GAACGGCTCATAGGACTGCCTTATCCAGACATATGAGAACCCATACAGGA
GAAAAACCCTACAAGTGTGACCTGTGTTACTATTCTGCCGCACGGAAATC
CAACTTAGACAACCATAAAGCAACACACACCGGTGAGAAACCCTACATGT
GTGGAGAATGTGGGTACAGGACGGTTAAGAGGACTGACTTAGCTAAACAT
ATGAGAACCCATACAGGAGAAAAACCCTACAAGTGTGACCAGTGCGACTA
TTCTGCTGTGCAAAAATCCTCTTTGGACCACCATCTTGCAAAACACACTG
GCGAGAAACCCTACGTGTGTGGGGAGTGTGGGTACAGGACTTCAAAAAAG
TCTCACCTATCCCAGCATATGAGGACCCATGCAGGAGATAAACCCTACAA
GTGTGACCAGTGTGATTATTCGGCAGCGAGTAAACCACAGTTAAACTCAC
ATCTAATGAAACACACTGGTGAGCAACCCTACCTGTGTGGGAAGTGTGGG
TTTGGGACAGATCGTAAGTCCCGCCTATCCGAGCATATGAGAACCCATAC
AGGAGAAAGACCCTACAAGTGTGACCAGTGTGACTATTCTGCTGCACAGA
AATCTACATTAGACAGACATCGAGCCCAGCACACCGGCGAGAAACCCTAC
ATGTGTGGGGAGTGTGGATACAGGGCAACACAAAAGTCTGCATTATCCCA
ACATATGAGAACCCATACAGGAGAAAAATCTCACGTGTGTTGGGAGTGTG
GTTACAGGGCATATCGAAAGTCGGACCTATCCAAACACATGAGAAAACAT
ACCGGCGAAAGACCCTACAAGTGCGATCATTGTGACTATTCTGCAGCAGA
TAAATCAACTTTAGTTAAACATCAAAGAATGCACACTGGTTTAAACCCTA
CATGTGTGGGGATTGAGGGTACAGGGCATTTGGAAGGTTTGACTTATCCC
TACATATGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000158-exon-Sc0000000-1564993656:1028165..1029840BlTCONS00000158-exon-Sc0000000-1564993656:1028165..1029840Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000158BlTCONS00000158-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000000genomeSc0000000:1028165..1029840 +
Properties
Property NameValue
GeneIDBlCUFF000084