BlTCONS00000156 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00000156
Unique NameBlTCONS00000156
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000000:1023907..1026288+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00000156 ID=BlTCONS00000156|Name=BlTCONS00000156|organism=Branchiostoma lanceolatum|type=mRNA|length=2382bp|location=Sequence derived from alignment at Sc0000000:1023907..1026288+ (Branchiostoma lanceolatum)
GGAACTGTAATGCATAGCATGTATTGCATGTAGCAGCTGCTAGTTGTCAA TTTGTACTTCAGCTTGCAGAAAAAAGTATGTCCTTGGTTCGGGTCATCAT TAGATGTTTGGGTCAAAGTAGTGCGGCACGGTCATTGAAAAAATTAGTAG AGGTTCTTCTGTGCATGTCAGTGAGGTGGCAACTGTTGAACCTGGGAGGA ATGCATCGGATTTAAGACTATGAGTCGGATTACGATGTTAGATATTTATT CCGCGTAAAGCTGCGTCTGAATGCTGTGACCGCCTACGATAATCGTCTGC AGCTCTTGTTTCTAATAGAATGGAATATATATCTCAACTATATTTTCTTA ACATCATTTGAGAGATGGCGGAGTTAACATGTGTGCCTCCCGTTCAAGAG CGTCATGCAGAACAGACTGAAATTGAGACGCCCATCAAAAAGGAGAAAGG ACGCATTGGATGGCAACTGGATGGACAACAGAACGTGCCGCATCAGGAAA CGTACAGTGAGGGTCAGGAAACCTTCGACTACTTCGGTGCAACCCAACCA ACCGGACATTCTTTGAACGAGACTTACAACAGTTGGGAGCAGATAACAGA CACGGGACGGCAACAGGGCGAGGAAAACTTAGTTCCAAACGACGAAACGT GCGGTAAAAGAGCAGAAATGGAAGAGTCCAGCTGTGAGCTTTCAACTGGA GAAGTGAGTACTGGACATCCTGGGATGGAGATATGCCATCATGGACATCC TGGGAAGGAGAGTGACAACAGGGAGACCCAAACAACAGACATGGGTCTGC AGCAGGAAACGTGTTATGGGAACTTTCCCCAACCTGACAACAAATCAACC TCACAGGTACAGGGGAGCAGAGGCAACATGGGAAGGCATTCGGTCAAACA GACTGGTGAGAAACCTTATATGTGCGGAGACTGTGGTTACAGGACAGCTT ATAAGTCTAATTTATCAAAGCATATGAGAACACATACAGGAGAGAAACCC TACAAGTGTGACCAGTGTGACTATTCTGCAGCAATTAAAAGACATTTGGA CAGACATTTGGCAAAACATAGTGGTGAGAAACCCTACATGTGTGGGGAGT GTGGGTACAGGACAACTCACAAGTCTTACTTATCCCGACATATGAAAACC CATATAGGAGAAAAATCTCTTAAGTGTGACTAGTTCGACTATTCTGCTGC ACAGAAAACTGCTTTGGATAAACATCTCGCAAAACGCTCTGGGGACAAAC CCTTCATGTGTGGGCAGTAAAACGTACAAACTAAGATTAATCTACATGTG TGACAAATGTACGGCACACACACCTTTGTCTTCCTTAAACGTGAAAAAAT GGAATTCTGGAAGAAGGGAGACCATGTTAACGTCCTTATATATGTACGTG GGTCTGATAACTACTTTGTCCGTAAAGAAATCTACATTCAAGACGAATAT ATCCTGACAGTCTGCTGCCGATGATGGTGGCAAGTGGGTAAAGCCCGTGT TGAATTGCACGTAATACTGTATGTTTTGCACTTGTAGTTTCAGTACTAGT AGGCATGAGTGTTGTATTTTTAATTGTGTTGAAATCGACCATTTGTTTGC TTAATGGTCTGTCTGCTAAATATACTGTAGAAGTGTTTGTGATCATCAAG GTATCTACGTTTTTTAACATTGGTATGTTTACTTTTCTTAATAGTAAATG ATTTTTGGGTGATACATTTGAAAGTATAAATCAACATTCACAATGATATG TATATTGTGTATAGTATATACCATGTAGTTAGAGTTTTGTACAATGTATT CCCAGTGTTTTGATATATATATATATATAATTCTAACACGATTAAGATAA CACAAATGGATGTAAGCAAAGCCAATGATTTAATGTGTTTATATTGTCTT GCTCAAGTGGTGTTATCAATAGATTCGATATTGACTTAAATCGTAGTACA GTAGNCAATAGATTCGATGTTGACTTATATCGTAGTACAGTAGACGTCTA AAATTTGGAGGTACGTGTTTGTCACTGATTGAAGAATATTCTAGAAACTG TGATTATGCGTGACTGACAAATCTCTTCAACGACTTCCTTGCTCGAGCAG AGCTTCAAACTATCAACGTGAACATTGATTCATATTCTTTCCTTTCTCTA AGTAACAGACTTGACTACGCACATCAATATAATCCGTTCTGTTTTATTTG GATATTAATGATAACTTTATTGCACAATAATTGAATATGTTAATAAATAA TACAATATCAATTATCAATAATACAATGTGAATGAATAATACAATTTTAA TGAAGTTACGACCCGGATTCTTGACTTTGTCATTGAAACATGGAAAGGGG GAAGTTGAGTAACTTATGCTACGTAAACCGGG

Coding sequence (CDS) from alignment at Sc0000000:1023907..1026288+

>BlTCONS00000156 ID=BlTCONS00000156|Name=BlTCONS00000156|organism=Branchiostoma lanceolatum|type=CDS|length=819bp|location=Sequence derived from alignment at Sc0000000:1023907..1026288+ (Branchiostoma lanceolatum)
ATGGCGGAGTTAACATGTGTGCCTCCCGTTCAAGAGCGTCATGCAGAACA
GACTGAAATTGAGACGCCCATCAAAAAGGAGAAAGGACGCATTGGATGGC
AACTGGATGGACAACAGAACGTGCCGCATCAGGAAACGTACAGTGAGGGT
CAGGAAACCTTCGACTACTTCGGTGCAACCCAACCAACCGGACATTCTTT
GAACGAGACTTACAACAGTTGGGAGCAGATAACAGACACGGGACGGCAAC
AGGGCGAGGAAAACTTAGTTCCAAACGACGAAACGTGCGGTAAAAGAGCA
GAAATGGAAGAGTCCAGCTGTGAGCTTTCAACTGGAGAAGTGAGTACTGG
ACATCCTGGGATGGAGATATGCCATCATGGACATCCTGGGAAGGAGAGTG
ACAACAGGGAGACCCAAACAACAGACATGGGTCTGCAGCAGGAAACGTGT
TATGGGAACTTTCCCCAACCTGACAACAAATCAACCTCACAGGTACAGGG
GAGCAGAGGCAACATGGGAAGGCATTCGGTCAAACAGACTGGTGAGAAAC
CTTATATGTGCGGAGACTGTGGTTACAGGACAGCTTATAAGTCTAATTTA
TCAAAGCATATGAGAACACATACAGGAGAGAAACCCTACAAGTGTGACCA
GTGTGACTATTCTGCAGCAATTAAAAGACATTTGGACAGACATTTGGCAA
AACATAGTGGTGAGAAACCCTACATGTGTGGGGAGTGTGGGTACAGGACA
ACTCACAAGTCTTACTTATCCCGACATATGAAAACCCATATAGGAGAAAA
ATCTCTTAAGTGTGACTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000156-exon-Sc0000000-1564993656:1023907..1023981BlTCONS00000156-exon-Sc0000000-1564993656:1023907..1023981Branchiostoma lanceolatumexon
BlTCONS00000156-exon-Sc0000000-1564993656:1024269..1026288BlTCONS00000156-exon-Sc0000000-1564993656:1024269..1026288Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000156BlTCONS00000156-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000000genomeSc0000000:1023907..1026288 +
Properties
Property NameValue
GeneIDBlCUFF000083