BlTCONS00000153 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00000153
Unique NameBlTCONS00000153
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000000:1021112..1022443+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00000153 ID=BlTCONS00000153|Name=BlTCONS00000153|organism=Branchiostoma lanceolatum|type=mRNA|length=1332bp|location=Sequence derived from alignment at Sc0000000:1021112..1022443+ (Branchiostoma lanceolatum)
ACTGGTGAGCAAACCTACATTTGTGGGGAGTGTGGGTACAGGACGGCTGA
GAAATCTTACTTATCTAGACATCTGAAAATCCATACAGGACTAAAACCTT
ACAAGTGTGACCAGTGCGACTATTCTGCCTTGAAGAGATCTAATCTAGAC
CGACATCTAGCAACACATACTGGTGAGAAACCCTACGTGTGTGGGGAGTG
TGGGTACAGGGCGGCCCAAAAGTCATACTTATCCGCACATATGAGAACCC
ATTCAGGACAAAGGCCCTACAAGTGTGACCAGTGCGACTATTCTGCGGCA
CAGAAATCAACATTGGACCAACATCTAGCAAGACACACTGGTGAGAAACC
CTACATGTGTGGGGAGTGTGGGTACAGGACAACTCACAAGTCTACATTAT
CCCGACATATGAGAACCCATGCAGGAGACAATCCCTACAAGTGTGACAAG
TGTGACTATTCTGCTGCACAGAAATCCTATTTGGTTAAACATCTAGCAAG
ACACACTGGTGAGAAACTTTACATGTGTGGGGAATGTGGGTACAAGGCAA
CTGAAAGTTCGTACCTATCTCGACACATGAAAACTCATACAGGAGAAAAA
CCATACACGTGTGGGGAGTGTGGGTACAAAGCAATTCAAAAGGCAAACTT
ATCCCGACATATGAAAACTCACACGGGAGAAAAATCTTTTAACTGTCATC
TGTGTGACTACTCTGCGGCTAGGAAATTCCACCTGACGAGACATTTGACA
AGACACACGAAAGAAACCAAATCTACAAGTGTGACAAGTGTTTAGCAGAC
CACTTTGCCCTCTTGAAAGGTGAAAAGCCATATGGTGGGAGACCTGGTGA
TATTAAAGCGTTTCTCGGTGCGTCATTTTAGTTACTTCATATAATCAGGA
TTTGAGCAATGTTCTACGAGCGAAGCTAGCACATATATAAATCTACTATG
TTACTGGTAACAAAGAAAACCATGGAAAAATTATCTGTAATATATTGACA
CTATTGTATTGCGCAGACAATGTAAAACCTTCACTGCAGCTCGCGTGCTA
CTAGATTAATAGATTATTTACTCTGCAAGTCAATGAATTGGGCTCGTGGG
CCCTGATGAATTATTGATCAGTTGGTCCCCGTTAGAAATTCACCGGGGTG
ACCATGTTTACTGTAGTTTTAATCTATACCTGAGCACGACACGTATTTAT
TTATTTATTGGTTCAGCAGGACACTTGGAGGGAGGGGGGCAGCATAAGTC
AGAGGAGCACCTGTGTGGAGTTAGGGCTGGGGTCGGTGGAGGTAGGGAAA
GATTTACAGTTAGGATTAGGGTTAAGATTAGG

Coding sequence (CDS) from alignment at Sc0000000:1021112..1022443+

>BlTCONS00000153 ID=BlTCONS00000153|Name=BlTCONS00000153|organism=Branchiostoma lanceolatum|type=CDS|length=795bp|location=Sequence derived from alignment at Sc0000000:1021112..1022443+ (Branchiostoma lanceolatum)
ACTGGTGAGCAAACCTACATTTGTGGGGAGTGTGGGTACAGGACGGCTGA
GAAATCTTACTTATCTAGACATCTGAAAATCCATACAGGACTAAAACCTT
ACAAGTGTGACCAGTGCGACTATTCTGCCTTGAAGAGATCTAATCTAGAC
CGACATCTAGCAACACATACTGGTGAGAAACCCTACGTGTGTGGGGAGTG
TGGGTACAGGGCGGCCCAAAAGTCATACTTATCCGCACATATGAGAACCC
ATTCAGGACAAAGGCCCTACAAGTGTGACCAGTGCGACTATTCTGCGGCA
CAGAAATCAACATTGGACCAACATCTAGCAAGACACACTGGTGAGAAACC
CTACATGTGTGGGGAGTGTGGGTACAGGACAACTCACAAGTCTACATTAT
CCCGACATATGAGAACCCATGCAGGAGACAATCCCTACAAGTGTGACAAG
TGTGACTATTCTGCTGCACAGAAATCCTATTTGGTTAAACATCTAGCAAG
ACACACTGGTGAGAAACTTTACATGTGTGGGGAATGTGGGTACAAGGCAA
CTGAAAGTTCGTACCTATCTCGACACATGAAAACTCATACAGGAGAAAAA
CCATACACGTGTGGGGAGTGTGGGTACAAAGCAATTCAAAAGGCAAACTT
ATCCCGACATATGAAAACTCACACGGGAGAAAAATCTTTTAACTGTCATC
TGTGTGACTACTCTGCGGCTAGGAAATTCCACCTGACGAGACATTTGACA
AGACACACGAAAGAAACCAAATCTACAAGTGTGACAAGTGTTTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000153-exon-Sc0000000-1564993656:1021112..1022443BlTCONS00000153-exon-Sc0000000-1564993656:1021112..1022443Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000153BlTCONS00000153-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000000genomeSc0000000:1021112..1022443 +
Properties
Property NameValue
GeneIDBlCUFF000080