BlTCONS00000150 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00000150
Unique NameBlTCONS00000150
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000000:1013370..1017990+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00000150 ID=BlTCONS00000150|Name=BlTCONS00000150|organism=Branchiostoma lanceolatum|type=mRNA|length=4621bp|location=Sequence derived from alignment at Sc0000000:1013370..1017990+ (Branchiostoma lanceolatum)
GTAACCTGTGACCCCTCGATACGACGAACAGACAAAGCCGCCCGAGTCCC AGTTACATGACGAGAGAAAAACATCACAGGAAGCAGGTAAGACTAACAAA CGAGCATCTAGGTATTCTGATTCGGAGCTTGGGAGCTTGAGAGTATTTCT GAGGAAAAAGGATCACCCTGAGAGCACAATTTATAGGCCTACTCTGGATT TGGATATACAATGTAGTGGAATAATAGGGTGGGAGGGGGGCAAAGCTGAT CATTCGTGAGATCCGTGCCACCTAAACCCAGGTTTGTTTTGACCCGTTTC AAACCGGTTTACCGTCTATTGGCGTACCATATCAGTTCTGTAAAAATGCC GCACCAGGGACTTGTAGCGGGGTGGGTGATGGGTCAGGCTTGTCGTATGA ACGTAACGTTTATGCAATGTGACATGTTTGCCTTATAAATTATTTATACC CCCGGCAGAAGTGTAAGGAAAGGTCTGGTTCTTGCCGACCTAGGAAGGAA GTAATGTCAGATGACTCAGATGTACGCGTATGTCAGATTGTCATTTCAGC TCTTACAAATGTTTAAACCGATATTTGTACGGTGTTTTACCGGCCTTCTG ACCATCACTAATGGGAAATTTATCGTTTCTTTCTGGAGGTCATTTGGGGT CATATAGTCTCCAGATCCTAATTTTTGGAATAATAGAGTGATTAGTGCTG TTTGCCTAAACCCTGTACCTGTAAAGTGTAGAAAACTCGTAAATACTTAT ATTCGAAGGTAGAATATGTAAATTTTCTTACAAACATGGTTATCTAACCA CTGAAAAAAGACACTTGGCTACAAATATAACTTACAGATAATTGACAATA CTTCTTAGGTACAGGTTCAGGTCCGGACCTGTAACTTAACCGCTGTACAT GTCTAAACTGCTGTACCTGTACCTGGGCATTGTTTAGGTGCACAGCCCTA TTATTAAAAATTTAAAAGAGTAATACTTTGCCAGATGTACTGAGTTTAAC TTGTATGACTGTACCCTCCCCTACAGAGTGGAAATGGACGATTCCATCTG TAAACATTCTGCTGAATGAGAGCTGTGTGTTGGGCATCCTGGGAAAAAGA TGGACAGCGCTGAACATTCCGGGAATGAGATGGACAGCACTGAACGTCCT AGGAATGAAACTGGCCACTTTCGAATCAAGGTAGAGCGTGATGAACATCC TGGGAAGGAGATTGACTGCTCTGAACAACCTGGGAAGGAGACTGGCCTCT TTGGAATCAAGGTAGAGTGTGATGAACATCCTGGGAAGGAGATGGACTGC TCTGAACATCCTGGGAAGGAGACTGGCCACTCAGGAATCAAGATAGAGTG CTCTGAACATCCTGGGAACGAGATTGACCTCTCTGAACATTCTGGGAATG AAACTGGCCACTTTCGAATCAAGGTAGAGTGTGCTGAACATCCTGGGAAG GAGATGGACTGCTCTGAACATCCTGTGAAGGAGACTGGCCACTCAGGAAT CAAGATAGAGTGCTCTGAACATCCTGGGAACGAGATTGACCTCTCTGAAC ATTCTGGGAATGAAACTGGCCACTTTCGAATCAAGGTAGAGTGTGCTGAA CATCCTGGGAAGGAGATGGACTGCTCTGAACATCTTAGGAAGGAGACTGG CCACTTTGGAGTCAATGTAGAGTGTGCTGAAGACACTGGGAAGGAGATGG ATTGTTCCGAACTGCATGGGGATGAAAATGACGATATGGAGACCCAGACA ACAGACATGGGCCTGCAGCAGGAAACGTGTGACGTGAACTTTCCCCAACC TGACAACAACCCAACCTTTCGGGTACAGCAGAGCATAGGCAATATGGGAA AAGGTGTAGTTACACACAGTGGTGAGAAACCCTTTGTGTGTAAGGAGTGT GGGTACAGTGCGGCTAAAATGTCCCGCCTATCCTATCATATGAGAACCCA TACAGGAGAAAAACCTTACAAATGTGACCAGTGCGACTATTCCGCTGCAC GGAAATCCACATTAGATGTACACTGTACAAAACACACAGGTGAGAGACCC TACATGTGTACAGAGTGTGAGTACAGGACAGCTGTGAGGTCCCGCCTATC CGAGCATATGAGAACCCATACAGGGGAAAAACCTTTCAAATGTGACCAGT GTGACTATTCTGCCTCTAAAAAATGCCACTTAGCTAGCCACCTAACAACA AGTCACACGCACAATTACGTGCGTGCCGAAGACACTGGGAAGGAGATGGA TTGTTCCGAACTCACTGGGAATGAAAATGACGACAGGGAGACCCAGACAA CAGACATGGGCCTGCAGCAGGAAACGTGTGGTCTGAACTTTCCCCAACCT GACAACAACCCAACCTTTCAGGTACAGCAGAGCATAGGCAATATGGGGAG TATCCTGTTTCTTGTACCTTGGCCCCTTAACCAAGCCCAGAATATAGGAA TGAACGAGGTTAAACACATTGGCAAGAAAGCCTTAATTTGTGGGGTGTGT GGGCACAGGGCACGTTGTAAGTCACACTTAACAATTCACATGAGAACCCA TACGGGAGAAAAACCCTTTAAGTGTGACCAGTGCGACTTTTCTGCACCAA CGAAATACCGTTTAAACTGCCACAAGGCAGCAAAACACAGTGATGAAAAA CGTTACCTCTGTGGAAAATGTGGGTACATGACGGCTAAAAAGTCTGATTT ATCCCAACACATGAGAACCCATACAGGAGGAAAACCCTACAAATGTGACC AGTGCGACTATTCTGCAGCAAAGAAATACAAGTTGGTTTGCCATATGGCA GCAAAGCACAATTGTGAGAAACCCTACACGTGTAATGAATGTGGGTACAG GACAGCTCTACAGTCTTATTTAACCCTACACATAAAAACATCACATACTG AAAAACTCTACAAATGTGACCAGTGTGACTATTCTGCAGCACTGAAAAGT GCATTAGACAACCATCTTGTGAAACACACCGGTGAGAAACGTTACATGTG TGAAACATGCGGCTACAGGACAGCTTATTGGATGAACTTAACACGACATA TGAGAACCCATAGGGGTGAAAAACCCTACAAGTGCGACCAGTGCGACTAT TCTGCAGGGCAGAAATATGATTTGGACCAACATCTAACAACTCACACTGG TGAGAAACCCTACATGTGTGGGGAGTGTGGGCACAGGACAGCTCGTAGAA AAACTTTATCCCGCCATATGAGAATCCATACAGGAAAAAAACCCTACAAG TGTGACCAGTGTGACTATTCTACAGCACTGAAAAAATCACTAGACAACCA TCTAGCGAAACACACTGGTGAGAAACCGTACGTCTGTAAGGTAAGGCATG TGGTTGGACACACTGGGGAGAAACTTTACATGTGTGGGGAGTGCGGGTAC AGGACGGCTCACAGGTCTAACTTATCCAAACATAAGAGAACCCACACAGG GGAAAAGCCGTACAAATGTAACCAGTGTGACTATTCTGCAGCGGTAAAAT CCACTTTGAATACACATCTAACAACGCACACTGGTGAGAATCCCCACAAG TGTGAACAATGCGGCTACAGGTCAGCTCGAAAGTCAGACTTTGCCAAACA TATGAGAACTCATACAGGTGAAAAACTTTACACATGTGACCATTGTGACT TTTTCACAGCACGCAAATCAAACTTATCCCGACATATAAGGAAACATACA GGAGCAAAAATCTACAATTGTGACAAGTGCGATTATTCTACAGCACATGA AGCCTCTTTTGACCGACATCTAGGAAAACACTCTGGTGACAAACCCTACA TGTGTGAAAAGTGCGGGTACAGGACGACTAAAAGGTCTGCCTTATCCCGA CACATGAGAACCCATACAGGAGAAAAACCCTTCAAGTGTGACCAGTGTGA CTATTCCGCAGCTCAGAAATACAATCTAGACCAACATCTAACAAAACACA CTGGTGAGAAGCCCCATAAGTGTGGGGAGTGTTCGTACATGACAGCTCAA AAGTCTTCTTTATCTAAACATATGAGGATCCATACAGGAGAAAAACCCTA CAAGTGTGACCAGTGTGACTATTCTGCTGCACAAAAAGCCAGTTTGGACC ATCATCGTTCAAAACACACCGGGCAGAAACCCTTCATGTGTGGGCAGTGT GACTTTTCTGCAGCCCTAAAGTCCACGTTAAAGCAACACCTCACAAAACA TACCAAACCCTACATGTGCGGGGAATGTTCGTACAGGACAGGTATTAAGT GTGACTTGACCGTACACATGAGAACTCATACCGGAGAAAAACCCTACAAA TGTGACCAGTGCGACTTTTCTGCAGCAAGTAATTCCAATTTGAGCCAACA CCGACGAAAACACACTGATAAGAACCGATGAAACTTACACGCGGGTTATG GTACGGGCACAGGCAGCTGGAAAGTATACGTTATCTCAATAAAATCTCGT TATCTCGACAAAAAAATACCCATAATAACTCATCCGTATATAACTATTCT GTTTCTCGGTATTGTTAGCCTCCATAGCAAGCTCTCTGGGCCATTTTTGT GAGGCTTATAATACACCTTTTGCTAATGACTTCTGTTTATACTGGGTCGT TTCTGCAGCGAACCCGTAACC

Coding sequence (CDS) from alignment at Sc0000000:1013370..1017990+

>BlTCONS00000150 ID=BlTCONS00000150|Name=BlTCONS00000150|organism=Branchiostoma lanceolatum|type=CDS|length=3282bp|location=Sequence derived from alignment at Sc0000000:1013370..1017990+ (Branchiostoma lanceolatum)
ATGGACAGCGCTGAACATTCCGGGAATGAGATGGACAGCACTGAACGTCC
TAGGAATGAAACTGGCCACTTTCGAATCAAGGTAGAGCGTGATGAACATC
CTGGGAAGGAGATTGACTGCTCTGAACAACCTGGGAAGGAGACTGGCCTC
TTTGGAATCAAGGTAGAGTGTGATGAACATCCTGGGAAGGAGATGGACTG
CTCTGAACATCCTGGGAAGGAGACTGGCCACTCAGGAATCAAGATAGAGT
GCTCTGAACATCCTGGGAACGAGATTGACCTCTCTGAACATTCTGGGAAT
GAAACTGGCCACTTTCGAATCAAGGTAGAGTGTGCTGAACATCCTGGGAA
GGAGATGGACTGCTCTGAACATCCTGTGAAGGAGACTGGCCACTCAGGAA
TCAAGATAGAGTGCTCTGAACATCCTGGGAACGAGATTGACCTCTCTGAA
CATTCTGGGAATGAAACTGGCCACTTTCGAATCAAGGTAGAGTGTGCTGA
ACATCCTGGGAAGGAGATGGACTGCTCTGAACATCTTAGGAAGGAGACTG
GCCACTTTGGAGTCAATGTAGAGTGTGCTGAAGACACTGGGAAGGAGATG
GATTGTTCCGAACTGCATGGGGATGAAAATGACGATATGGAGACCCAGAC
AACAGACATGGGCCTGCAGCAGGAAACGTGTGACGTGAACTTTCCCCAAC
CTGACAACAACCCAACCTTTCGGGTACAGCAGAGCATAGGCAATATGGGA
AAAGGTGTAGTTACACACAGTGGTGAGAAACCCTTTGTGTGTAAGGAGTG
TGGGTACAGTGCGGCTAAAATGTCCCGCCTATCCTATCATATGAGAACCC
ATACAGGAGAAAAACCTTACAAATGTGACCAGTGCGACTATTCCGCTGCA
CGGAAATCCACATTAGATGTACACTGTACAAAACACACAGGTGAGAGACC
CTACATGTGTACAGAGTGTGAGTACAGGACAGCTGTGAGGTCCCGCCTAT
CCGAGCATATGAGAACCCATACAGGGGAAAAACCTTTCAAATGTGACCAG
TGTGACTATTCTGCCTCTAAAAAATGCCACTTAGCTAGCCACCTAACAAC
AAGTCACACGCACAATTACGTGCGTGCCGAAGACACTGGGAAGGAGATGG
ATTGTTCCGAACTCACTGGGAATGAAAATGACGACAGGGAGACCCAGACA
ACAGACATGGGCCTGCAGCAGGAAACGTGTGGTCTGAACTTTCCCCAACC
TGACAACAACCCAACCTTTCAGGTACAGCAGAGCATAGGCAATATGGGGA
GTATCCTGTTTCTTGTACCTTGGCCCCTTAACCAAGCCCAGAATATAGGA
ATGAACGAGGTTAAACACATTGGCAAGAAAGCCTTAATTTGTGGGGTGTG
TGGGCACAGGGCACGTTGTAAGTCACACTTAACAATTCACATGAGAACCC
ATACGGGAGAAAAACCCTTTAAGTGTGACCAGTGCGACTTTTCTGCACCA
ACGAAATACCGTTTAAACTGCCACAAGGCAGCAAAACACAGTGATGAAAA
ACGTTACCTCTGTGGAAAATGTGGGTACATGACGGCTAAAAAGTCTGATT
TATCCCAACACATGAGAACCCATACAGGAGGAAAACCCTACAAATGTGAC
CAGTGCGACTATTCTGCAGCAAAGAAATACAAGTTGGTTTGCCATATGGC
AGCAAAGCACAATTGTGAGAAACCCTACACGTGTAATGAATGTGGGTACA
GGACAGCTCTACAGTCTTATTTAACCCTACACATAAAAACATCACATACT
GAAAAACTCTACAAATGTGACCAGTGTGACTATTCTGCAGCACTGAAAAG
TGCATTAGACAACCATCTTGTGAAACACACCGGTGAGAAACGTTACATGT
GTGAAACATGCGGCTACAGGACAGCTTATTGGATGAACTTAACACGACAT
ATGAGAACCCATAGGGGTGAAAAACCCTACAAGTGCGACCAGTGCGACTA
TTCTGCAGGGCAGAAATATGATTTGGACCAACATCTAACAACTCACACTG
GTGAGAAACCCTACATGTGTGGGGAGTGTGGGCACAGGACAGCTCGTAGA
AAAACTTTATCCCGCCATATGAGAATCCATACAGGAAAAAAACCCTACAA
GTGTGACCAGTGTGACTATTCTACAGCACTGAAAAAATCACTAGACAACC
ATCTAGCGAAACACACTGGTGAGAAACCGTACGTCTGTAAGGTAAGGCAT
GTGGTTGGACACACTGGGGAGAAACTTTACATGTGTGGGGAGTGCGGGTA
CAGGACGGCTCACAGGTCTAACTTATCCAAACATAAGAGAACCCACACAG
GGGAAAAGCCGTACAAATGTAACCAGTGTGACTATTCTGCAGCGGTAAAA
TCCACTTTGAATACACATCTAACAACGCACACTGGTGAGAATCCCCACAA
GTGTGAACAATGCGGCTACAGGTCAGCTCGAAAGTCAGACTTTGCCAAAC
ATATGAGAACTCATACAGGTGAAAAACTTTACACATGTGACCATTGTGAC
TTTTTCACAGCACGCAAATCAAACTTATCCCGACATATAAGGAAACATAC
AGGAGCAAAAATCTACAATTGTGACAAGTGCGATTATTCTACAGCACATG
AAGCCTCTTTTGACCGACATCTAGGAAAACACTCTGGTGACAAACCCTAC
ATGTGTGAAAAGTGCGGGTACAGGACGACTAAAAGGTCTGCCTTATCCCG
ACACATGAGAACCCATACAGGAGAAAAACCCTTCAAGTGTGACCAGTGTG
ACTATTCCGCAGCTCAGAAATACAATCTAGACCAACATCTAACAAAACAC
ACTGGTGAGAAGCCCCATAAGTGTGGGGAGTGTTCGTACATGACAGCTCA
AAAGTCTTCTTTATCTAAACATATGAGGATCCATACAGGAGAAAAACCCT
ACAAGTGTGACCAGTGTGACTATTCTGCTGCACAAAAAGCCAGTTTGGAC
CATCATCGTTCAAAACACACCGGGCAGAAACCCTTCATGTGTGGGCAGTG
TGACTTTTCTGCAGCCCTAAAGTCCACGTTAAAGCAACACCTCACAAAAC
ATACCAAACCCTACATGTGCGGGGAATGTTCGTACAGGACAGGTATTAAG
TGTGACTTGACCGTACACATGAGAACTCATACCGGAGAAAAACCCTACAA
ATGTGACCAGTGCGACTTTTCTGCAGCAAGTAATTCCAATTTGAGCCAAC
ACCGACGAAAACACACTGATAAGAACCGATGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000150-exon-Sc0000000-1564993656:1013370..1013455BlTCONS00000150-exon-Sc0000000-1564993656:1013370..1013455Branchiostoma lanceolatumexon
BlTCONS00000150-exon-Sc0000000-1564993656:1014396..1017990BlTCONS00000150-exon-Sc0000000-1564993656:1014396..1017990Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000150BlTCONS00000150-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000000genomeSc0000000:1013370..1017990 +
Properties
Property NameValue
GeneIDBlCUFF000077