BlTCONS00000148 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00000148
Unique NameBlTCONS00000148
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000000:1008791..1012536+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00000148 ID=BlTCONS00000148|Name=BlTCONS00000148|organism=Branchiostoma lanceolatum|type=mRNA|length=3746bp|location=Sequence derived from alignment at Sc0000000:1008791..1012536+ (Branchiostoma lanceolatum)
CAGGAGCTCAAGCACTCCTCCTGTCATCTCAACAGGGTACTGCAGCTCTT
ATATAACTCTTATCCTAACCCTGAGGAAAGTCTAGCCTATTTGCGGAGAG
AGACTCGGGAGCTATAATAGGTCTGGATTCCAGGCTAAGGACTGTCAGCT
TCTGCAGGAGCTCAAGCACTCCTCCTGTCATCTCAACAGGGTACTGCAGC
TCTCCTCAAGCCACAATTAATTTTATGATGTTATTTCACTCTTGGTGTAC
AATTTTTTGTAGCATGATTATAGCAGGGCTGTGACAGAATCACATGCATT
CTAACAGTAGATCTCTCCTGCCGTTTCAGGACATGTTTGGTGCCCGATGT
CAGGACGTCCATGTGCAGAGGCCGGACACGTTCACCCGGCGGTACCAGGT
CCGGTTAGGGGAGGAAACCATCCAGGTACGGGTCACACCTCCTTGTGTTA
TCTTTGCCATCCTGGTCTTCTATCTACTAAACATTTGCTTTCAGTTGGTT
CATCTTTATGAATGATCATCATCATCATGTCAGGCGGCTTGCCTGGACTA
AGGCTGCTCTCTCCCTCCATATGACACCACCCGCCATTAAGTGCTCTAGG
TCTTCAGACCTCACCCCTCCACCCCCGGCAAGTTGGACTATCAAGAGTGA
TAACTCACGAAATCTAAGGTTTTCATTGATTCTGTCATTTCAAGACTCAA
CTTGGGATTATGGAGACTGTCATGGAGATTTGGGAGAAGTTCATGATGAT
TCTTTAACATTGCAATATACTTTCATCTAATTGTTCCATCCTATTTTGAA
TCCTAAGGCACCCATGACTCTGTTTTGCCACTGTAACCCATGTGTCTGTT
TTACCCCCTGTAGGCTACCTAGCTGTCTGTCTATTCTATACCCAAGATGT
TTTATATAATCCCTATAAGTATAATCCCTATAAGCCATGGGTCTGTTGTA
CCCCTGTAACCCATGGGTCTGTTGTACCCCTATAGGCACCCATGGGTCTG
TTCCACCCCCAGCTGTTTGGGCTGGTCGGCAGCAGTCTGGTGCACACCCA
GCTTAGGAACCAGGGAGACCCGGAGGACGTCCATGACGAACACTACCTGC
TGCAGACCCAGAGCACGCAGCAACAGGTAACCTCTAACCTCTCACACTTA
ACCTTTGACCTCTAACCCACCACTACCTCCTGCAGAGCATGCAGCAACAG
GTCACCGTACACTTTTCGCACATAGCCCCTAAACTTTGACCCACCACTTC
CACCAGCAAACCCAGAGCATGCAGCAAAAGGTAACCTTTAACCTATCACA
CCTAACATCTGACCTCTAACCCACCACCACCTGCACAACAGCAGGTAATC
TAAAAAAATCGCAGCTGTTTTTCTCACCTATCTTGCGCCTGTGGAAATGT
TTGTAGTCTTTATACATGTACCCCTGTGCAAAAATAAATTGTACACATGT
CTGCAAGCTCTCAATGACATTTTCGGCAGAAATACATCCGGTGTTTTCTC
GATCAGCGTATGATTTTGGGGGATTGTTTATAGATTTTAGAATCTGTGAT
AATATCCTGTATTTGCAGGTGGCCAAAGCCGTGGCAGAGAAGAAAGCCAA
GGCGAGCAGTAAGCAGGACCAGGGGGCAGACGGGGACAAGACCTCGCCCG
ACTCCAAACCCAGCCTGGAGCCCAGGCACAAGAGGGCGCGGGAGGACGCA
GGGGGGTCGGAGGCTAAGCATCGCAGGGGGGTGGTCCGGCTACCCTCTAC
CTCCCGGAGGGGGGTGGAGCCTCCCCCCCTGAAACTGATGGGGGTGGACC
AGGCCATTCTGCACAGTATAGAGTGCTGTGGTGGGTATAAGTGTGATAAC
ACAGTACAGTGCAGAGTGTGATAATACAGTATGTAATACCTGGGCTGTGA
TAACGTGCGATACATGTATTCCTGTCCAGATGACATTTTGGGTTATCACA
TGGGCTTCTGCTTGTATCGCATGGGCTTCCACCGAATGACTTGTATCGCA
TGGCCAAGCACGTGATTCAGTCAATTTCATGAAACTTGTGAAAATAGAAC
ATCATAATCTTGGATTTGGTCAATTTTCAATCACAACTAATACTAGATGT
TTGTCTGCAGCGTCTGACGAGACGAAGAAGAAGATGTTCTCCTGCATCCT
GGTGGTGGGAGGGGGGCTGAACTTCCCGGGCGCGCAGAACTTCCTGCTGC
ACAGAGTCAGGTCACANGCGCGCAGAACTTCCTGCTGCACAGGGTCAGGT
CACAGCTGCCCGCCAAGTACCGCAGCATCGCCGACACCATGGAGGTCATC
AACAGGCCAAAGGTCAGTAGGCTGGTCAGATGTCAGAACTACTCGCACAG
TAAAGATAATCAACAGACGAAAGGTCATTAGGTCATCCCCGGGCCAAAGG
TCTGTAGGTCATTGTCTGGTCAGAGGTTAATAGGCAATACAGGTCTAGAG
ATTATTAGGTCATCACCAGGCCAAAGGACCTTATGTCATCACCTGGTCAA
AGGTCATCAGGTCATCAGGTCAAAGTTCAGAAACACATGCCATGAAGGTT
ATCACCTTTTCTATAGGTCAGATGGAAGCTTTACCATGGTTGAATCAGGA
CTGGGTGGTGTATGTTTGTACCCAGCCCTCAGCTGATTTTTATTACTTGT
TTTGACCTTTACAGGACCCGCAGATGGTTTGCTGGAAGGATGCTGGTTTT
TGTGTTTGTTTGTTTTTTAATAATGTGTGTTTGTTTGCTCCCATGTAGGA
CCAGGACCCGCAGATGGTGTGCTGGAAGGGAGCGGCCGTCCTGGCGTGTC
TGGACACGACACAGGAGCTGTGGGTGGGGCAGCGCGAGTGGAGGAAGTTC
GGCATCAGGATACTGAGGGAGAGGTCGCCGTTTGTCTGGTAGTCGGCGAG
AAGCGGTCGCCATTTGTCTGGCCGTCAATGGGAAGCGGTCGCCGTTTGTC
TGGTACTCAGTGGGAAGCGGTTACCATTTGTCTGGTAGTCAGCGAGAAGC
AGTCGCTGTTCGTCTGGTAGTCAGCGGGAATCGGTCGCCGTTTGTCTGGT
AGTCAGCGGGAAGCGGTCGCCATTTTTCTGATTTTCAGGAAGAGGTCGCA
CTCTTGTGTATTAGTCAACTGTACTGTGTAAATAAACGTGATGATGATGA
TGATACAATTTTTTTTATTATTCATAACATTCAAACTTTACATTGGTATA
GTCTTGCAACTACAAATGTATATATACATAGTTGAATTGCACTGCTGACA
ATACATTGGACTTTTGGACACTATAAACAGCTAAGACAATTGCATTTCCT
CTAGAATCATAAGCTGTATCTGGGAATTCATTAAAACCTACTCTACTTAT
TGCTCTTGTCTGAAATTGGAAATAACTTAGATTTAACCTTCTCCCTGCTG
CCTAACTCTGTAACCAATAGAGAATGGGGTGGCAAATGGCTACTTCAGTG
TGCTAGAGGTTAAGCTTTATTTTTGGCACCTTTATCAGTGCTTGTATTGT
TTTCATCATAATGTCGGCTGGGCTGTTTGTGTGGGAAAAAAAGAAGACCA
TAATATTTTTATACAGTACATATAAGTGCAGATGATACATACAGTCTGTT
CAGCTTGCATGTACCTTGGGAAAATTCCCTATAAGGTGTTCTCTGCAAGA
ACAAGAAATAAAAAACCATCACACATTGTATTTAGGTCCCTACAAGGACC
CCTGCTCTTTTCAATAGGTCGGTCCATTGAAGAGACATGGCTGCTG

Coding sequence (CDS) from alignment at Sc0000000:1008791..1012536+

>BlTCONS00000148 ID=BlTCONS00000148|Name=BlTCONS00000148|organism=Branchiostoma lanceolatum|type=CDS|length=855bp|location=Sequence derived from alignment at Sc0000000:1008791..1012536+ (Branchiostoma lanceolatum)
CAGGAGCTCAAGCACTCCTCCTGTCATCTCAACAGGGACATGTTTGGTGC
CCGATGTCAGGACGTCCATGTGCAGAGGCCGGACACGTTCACCCGGCGGT
ACCAGGTCCGGTTAGGGGAGGAAACCATCCAGGCACCCATGGGTCTGTTC
CACCCCCAGCTGTTTGGGCTGGTCGGCAGCAGTCTGGTGCACACCCAGCT
TAGGAACCAGGGAGACCCGGAGGACGTCCATGACGAACACTACCTGCTGC
AGACCCAGAGCACGCAGCAACAGGTGGCCAAAGCCGTGGCAGAGAAGAAA
GCCAAGGCGAGCAGTAAGCAGGACCAGGGGGCAGACGGGGACAAGACCTC
GCCCGACTCCAAACCCAGCCTGGAGCCCAGGCACAAGAGGGCGCGGGAGG
ACGCAGGGGGGTCGGAGGCTAAGCATCGCAGGGGGGTGGTCCGGCTACCC
TCTACCTCCCGGAGGGGGGTGGAGCCTCCCCCCCTGAAACTGATGGGGGT
GGACCAGGCCATTCTGCACAGTATAGAGTGCTGTGCGTCTGACGAGACGA
AGAAGAAGATGTTCTCCTGCATCCTGGTGGTGGGAGGGGGGCTGAACTTC
CCGGGCGCGCAGAACTTCCTGCTGCACAGAGTCAGGTCACANGCGCGCAG
AACTTCCTGCTGCACAGGGTCAGGTCACAGCTGCCCGCCAAGTACCGCAG
CATCGCCGACACCATGGAGGTCATCAACAGGCCAAAGGACCAGGACCCGC
AGATGGTGTGCTGGAAGGGAGCGGCCGTCCTGGCGTGTCTGGACACGACA
CAGGAGCTGTGGGTGGGGCAGCGCGAGTGGAGGAAGTTCGGCATCAGGAT
ACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000148BlTCONS00000148-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000148-exon-Sc0000000-1564993656:1008791..1008826BlTCONS00000148-exon-Sc0000000-1564993656:1008791..1008826Branchiostoma lanceolatumexon
BlTCONS00000148-exon-Sc0000000-1564993656:1009120..1009215BlTCONS00000148-exon-Sc0000000-1564993656:1009120..1009215Branchiostoma lanceolatumexon
BlTCONS00000148-exon-Sc0000000-1564993656:1009776..1009916BlTCONS00000148-exon-Sc0000000-1564993656:1009776..1009916Branchiostoma lanceolatumexon
BlTCONS00000148-exon-Sc0000000-1564993656:1010359..1010620BlTCONS00000148-exon-Sc0000000-1564993656:1010359..1010620Branchiostoma lanceolatumexon
BlTCONS00000148-exon-Sc0000000-1564993656:1010901..1011102BlTCONS00000148-exon-Sc0000000-1564993656:1010901..1011102Branchiostoma lanceolatumexon
BlTCONS00000148-exon-Sc0000000-1564993656:1011539..1012536BlTCONS00000148-exon-Sc0000000-1564993656:1011539..1012536Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000000genomeSc0000000:1008791..1012536 +
Properties
Property NameValue
GeneIDBlCUFF000076