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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000000:1005472..1012536+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00000146 ID=BlTCONS00000146|Name=BlTCONS00000146|organism=Branchiostoma lanceolatum|type=mRNA|length=7065bp|location=Sequence derived from alignment at Sc0000000:1005472..1012536+ (Branchiostoma lanceolatum)
CTGCATGAGCAAGGCTTGAGAGGAGTGCAGCAAGCTCTGATGTCAATCAC
CACGTCGTCAGGTCAACACAGACTGGCCCCTCCCACAGAACAGGTAAGCT
GTCAATCACCATGTCGCCAGGGCAACACAGACTGACCACGTCAACAGTAA
AGGCTATTTAACTTCTGGCATCCTTTCTCAAGTTCTTCCAATGTAATATG
TTTTGATGATTTTTCTTGAATGGAAGGCTGGCCATTATAGCTATAGAGTG
TTGCTTTTGAGATAAAGAGAATGTTGAGTTTCTGCAGCTTGTAGCCTACA
ATACACAGGTGGGCCCCCACATTGTTATTAGTACAAATATTGCTGTGAAT
GATATACTAGTATCATATCTCCCATGTCTCCAGCTTGCAGCCTTCAATGC
ACAGGTTGGTCCCCACATTGTTTTAGTACAAATATTGCTGTTAATGATAT
ATTATATCTCCCATGTCTTCAGCTTGCAGCCTACAATGCCCAGGTGGGTC
CCCACATCGAGGAGACGTCAGACCTGGAGTGGACCGACACCAGCTCCAAA
CCCGAGTACTTAGTGGGACAGGAGGTGAGCAGACCTGTACCATGTACTAT
CTGTAGTCGCGGACTTACTGAGCCTTCCTCTGTATCTAGAGTTCACTGTT
CATTGTGTCCTTGTCGAAAAGAGCTAGGGGAATTATTTGGTCAAAGGAAA
CTGTATGATACTGTACTAAGCATCTGTCTACTGTTGTTGAATCTTTACAG
CCACTCGTCTCGTTGGCTTCTGGCCACTTTGTGCTATGACCCTTCTTCTC
TCTCTTCTGTCATGACCAGTGGAAGCTTAGCTCTTCAGTGAGCTAGCTAC
GACTGGACTGAGATCACTTTCCTCTTCCCAGTACCACCTTTTCCTCTAGC
ATCGCAGCCTGTCAATGCCAATGATATAACATTAGCCAAAGCTGTGTTCA
TGTTCTTGAACTACATATCTATATCCCCCCAGGTCCTGTACCTGCATCCC
TCGGAGTGCTACAACATCCACTGGCCCATGTCCTGTGGTCAGCTCCACCT
GCACAGCGGCCCCGGAGGGTCTCTCACCGCAGTTCTGGCTGACCTGGAGA
CCATATGGACCACGGCCATCGAGAAGTTCCTTGACATTCCTATCGAGGAC
CTCAAAGTAGGCTTCTGTCTTGTAAACTATTTTTTTTCTCCCCTCCATTC
ATTGCCCGCGTAATGAATATCTGTAAAGTCCTAGGTTATGCTTGGGTCAC
ATTTTCAATCCGGGGCCCGGCCGGGCAGTGTTTGGGAACAAAATGTATGA
TATAAAAGACAACAAAAAACACAAAACGTACCAAAAATTATTCAAGAGCA
TAGCTAGTGCATATTTATTGATATACATTTTAATTTTTCGTTTCCGCAAA
CAGCCCGGCCGGGCCCCGGTTAGGAAATGTGACCCAAGCATAAGGGGGAA
GCACTGTAGATGTGACATTCTTATTAAGCTCAACAAATTTAGCTACAAAC
ATTTCCAATGCCATCCAACATAATACATTTTTCATTATTGAAAAGAACTT
ACTATTAGTATTATCAACTATTATTTCAACAATGAAAAATGCTGGATGGG
ATTTGAAATGTCTACAACTCTCTACATTTGTTTAATGGTTAGATTTGATC
AAAATGTTATTATTCCGTCCTGGATGTCTAACCTTCATAAACGCACTGCA
CATATGTTTTTGAGTTATGTTTAACACTACAGATATACATGTATCCATCA
TGATGTTTGTTTATTTTTGTTTATTTGTTTTTATTTATTTTTCAGCACTA
CAGATGCATCCTGCTTGTCCCAGACATCTACAACAGACAGCACATCAAGG
AGCTCATTAACCTGCTGCTGAACAGGCTGGGCTTCTCTGCAGCCATCGCA
CATCAGGTGGGCTGTCAATCAATCAACCAGTCAATCAATCAATCAATCAA
TTGGTCATATTTAAAGTCATTAACCTGCTGCTGAACAGGCTGGGCTTCTC
TGCCGCCATCGCAGATCAGGTGGGCTGTCAGTTAGTCCATCCCTCCATCC
GACCGTCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCAT
CCATCTGTTACTATTTTTGTCAACTGGTCAACCAGATGTACATAATTTCT
GAAATGTACATAATCTCCCATATCTTAGACTGCTGATGTTGAGTTGAAAC
CCTTTTCTTCATTAGTACTAGTAGTGTGCATGTGGTAATGTGTCAGGCGG
CTGTTGGACTGTGTCTGTGACCCCTTGCAGGAATCAGTTTTGGTATTAGG
TTACTACAAATGTATCTGTTTACAGGAGTCTGTGTGTGCGACGTTCGGCA
GCGGTGTGGCGAGTGCCTGTGTGTGTTAGAGGTTAAAGGTTATGTGTGTT
TACAGGAGTCTGTGTGTGCGACGTTCGGAAGCGGGGTGGCCAGTGCCTGC
GTTGTGGATGTCGGGGACCAAAAGACGGCTGTTTGCTGCGTAGAAGACGG
TCTCTCACACAGAAACTCAAGGTCAGTATGTAACATTACAGATGGCTTTT
ACAGATGAGGCAATGTATATCATATTTGAATCGATTTATTTGATATCTCA
TATTTGTTAATGCCTGCAGTGAATTGTCTCCATTAAGTGTGTGTAGCTGG
GTGTCTGGATGGGTATGTTGATTGTTGCTTGTCAGGGTGTGTGACTGCAT
GTGTAGATGGGTGTGTAGATGGGTGCATATCTGGATGTGTGACTTAGCTT
AGTGTGTGAAGGGGTGTGTGGATGGGTTTTTACCTGGGCATGTGGCTGGT
TGAATGGCTGGGTGTATTTATAGGTGTTTGTGGTTGGGCGTGTGGATGGG
TTTGTGGATAGCTGTGTGGTTGCATGTGTGGCTCTGTGTGTAGATGGGTG
TGTAGATGGGTATGGATAGGTGTATGACTGGATGTATAGATGGGTGTATA
TGTATTAGTGTGTGGATGGGTGCATGGCTGGGTGTATAGATGGGTGTATA
TATTGGTACATGGATGGGTGTATGGCTGGGTGTTAAGATGGGTGTACCTG
GGTACATGTATTTAGATGTCCTTCCCTCCCCCCAGACTATGGCTGGACTA
CGGCGGCAGGGACATCACCAGGTGCCTGGAGTGGCTGCTGAGGAAAAACA
ACTTCCCATATAAGGACTGCAACCTGCTGGACAGGCTGGACTGTCAGCTG
CTGCAGGAGCTCAAGCACTCCTCCTGTCATCTCAACAGGGTACTGCAGGT
TTCGTATATAACACACATATAACACACTCTAGGGCTAACCTAAACCCATA
TAAGGACTGTCAGCTGCTACAGGAGCTCAAGCACTCCTCCTGTCATCTCA
ACAGGGTACTGCAGCTCTTATATAACTCTTATCCTAACCCTGAGGAAAGT
CTAGCCTATTTGCGGAGAGAGACTCGGGAGCTATAATAGGTCTGGATTCC
AGGCTAAGGACTGTCAGCTTCTGCAGGAGCTCAAGCACTCCTCCTGTCAT
CTCAACAGGGTACTGCAGCTCTCCTCAAGCCACAATTAATTTTATGATGT
TATTTCACTCTTGGTGTACAATTTTTTGTAGCATGATTATAGCAGGGCTG
TGACAGAATCACATGCATTCTAACAGTAGATCTCTCCTGCCGTTTCAGGA
CATGTTTGGTGCCCGATGTCAGGACGTCCATGTGCAGAGGCCGGACACGT
TCACCCGGCGGTACCAGGTCCGGTTAGGGGAGGAAACCATCCAGGTACGG
GTCACACCTCCTTGTGTTATCTTTGCCATCCTGGTCTTCTATCTACTAAA
CATTTGCTTTCAGTTGGTTCATCTTTATGAATGATCATCATCATCATGTC
AGGCGGCTTGCCTGGACTAAGGCTGCTCTCTCCCTCCATATGACACCACC
CGCCATTAAGTGCTCTAGGTCTTCAGACCTCACCCCTCCACCCCCGGCAA
GTTGGACTATCAAGAGTGATAACTCACGAAATCTAAGGTTTTCATTGATT
CTGTCATTTCAAGACTCAACTTGGGATTATGGAGACTGTCATGGAGATTT
GGGAGAAGTTCATGATGATTCTTTAACATTGCAATATACTTTCATCTAAT
TGTTCCATCCTATTTTGAATCCTAAGGCACCCATGACTCTGTTTTGCCAC
TGTAACCCATGTGTCTGTTTTACCCCCTGTAGGCTACCTAGCTGTCTGTC
TATTCTATACCCAAGATGTTTTATATAATCCCTATAAGTATAATCCCTAT
AAGCCATGGGTCTGTTGTACCCCTGTAACCCATGGGTCTGTTGTACCCCT
ATAGGCACCCATGGGTCTGTTCCACCCCCAGCTGTTTGGGCTGGTCGGCA
GCAGTCTGGTGCACACCCAGCTTAGGAACCAGGGAGACCCGGAGGACGTC
CATGACGAACACTACCTGCTGCAGACCCAGAGCACGCAGCAACAGGTAAC
CTCTAACCTCTCACACTTAACCTTTGACCTCTAACCCACCACTACCTCCT
GCAGAGCATGCAGCAACAGGTCACCGTACACTTTTCGCACATAGCCCCTA
AACTTTGACCCACCACTTCCACCAGCAAACCCAGAGCATGCAGCAAAAGG
TAACCTTTAACCTATCACACCTAACATCTGACCTCTAACCCACCACCACC
TGCACAACAGCAGGTAATCTAAAAAAATCGCAGCTGTTTTTCTCACCTAT
CTTGCGCCTGTGGAAATGTTTGTAGTCTTTATACATGTACCCCTGTGCAA
AAATAAATTGTACACATGTCTGCAAGCTCTCAATGACATTTTCGGCAGAA
ATACATCCGGTGTTTTCTCGATCAGCGTATGATTTTGGGGGATTGTTTAT
AGATTTTAGAATCTGTGATAATATCCTGTATTTGCAGGTGGCCAAAGCCG
TGGCAGAGAAGAAAGCCAAGGCGAGCAGTAAGCAGGACCAGGGGGCAGAC
GGGGACAAGACCTCGCCCGACTCCAAACCCAGCCTGGAGCCCAGGCACAA
GAGGGCGCGGGAGGACGCAGGGGGGTCGGAGGCTAAGCATCGCAGGGGGG
TGGTCCGGCTACCCTCTACCTCCCGGAGGGGGGTGGAGCCTCCCCCCCTG
AAACTGATGGGGGTGGACCAGGCCATTCTGCACAGTATAGAGTGCTGTGG
TGGGTATAAGTGTGATAACACAGTACAGTGCAGAGTGTGATAATACAGTA
TGTAATACCTGGGCTGTGATAACGTGCGATACATGTATTCCTGTCCAGAT
GACATTTTGGGTTATCACATGGGCTTCTGCTTGTATCGCATGGGCTTCCA
CCGAATGACTTGTATCGCATGGCCAAGCACGTGATTCAGTCAATTTCATG
AAACTTGTGAAAATAGAACATCATAATCTTGGATTTGGTCAATTTTCAAT
CACAACTAATACTAGATGTTTGTCTGCAGCGTCTGACGAGACGAAGAAGA
AGATGTTCTCCTGCATCCTGGTGGTGGGAGGGGGGCTGAACTTCCCGGGC
GCGCAGAACTTCCTGCTGCACAGAGTCAGGTCACANGCGCGCAGAACTTC
CTGCTGCACAGGGTCAGGTCACAGCTGCCCGCCAAGTACCGCAGCATCGC
CGACACCATGGAGGTCATCAACAGGCCAAAGGTCAGTAGGCTGGTCAGAT
GTCAGAACTACTCGCACAGTAAAGATAATCAACAGACGAAAGGTCATTAG
GTCATCCCCGGGCCAAAGGTCTGTAGGTCATTGTCTGGTCAGAGGTTAAT
AGGCAATACAGGTCTAGAGATTATTAGGTCATCACCAGGCCAAAGGACCT
TATGTCATCACCTGGTCAAAGGTCATCAGGTCATCAGGTCAAAGTTCAGA
AACACATGCCATGAAGGTTATCACCTTTTCTATAGGTCAGATGGAAGCTT
TACCATGGTTGAATCAGGACTGGGTGGTGTATGTTTGTACCCAGCCCTCA
GCTGATTTTTATTACTTGTTTTGACCTTTACAGGACCCGCAGATGGTTTG
CTGGAAGGATGCTGGTTTTTGTGTTTGTTTGTTTTTTAATAATGTGTGTT
TGTTTGCTCCCATGTAGGACCAGGACCCGCAGATGGTGTGCTGGAAGGGA
GCGGCCGTCCTGGCGTGTCTGGACACGACACAGGAGCTGTGGGTGGGGCA
GCGCGAGTGGAGGAAGTTCGGCATCAGGATACTGAGGGAGAGGTCGCCGT
TTGTCTGGTAGTCGGCGAGAAGCGGTCGCCATTTGTCTGGCCGTCAATGG
GAAGCGGTCGCCGTTTGTCTGGTACTCAGTGGGAAGCGGTTACCATTTGT
CTGGTAGTCAGCGAGAAGCAGTCGCTGTTCGTCTGGTAGTCAGCGGGAAT
CGGTCGCCGTTTGTCTGGTAGTCAGCGGGAAGCGGTCGCCATTTTTCTGA
TTTTCAGGAAGAGGTCGCACTCTTGTGTATTAGTCAACTGTACTGTGTAA
ATAAACGTGATGATGATGATGATACAATTTTTTTTATTATTCATAACATT
CAAACTTTACATTGGTATAGTCTTGCAACTACAAATGTATATATACATAG
TTGAATTGCACTGCTGACAATACATTGGACTTTTGGACACTATAAACAGC
TAAGACAATTGCATTTCCTCTAGAATCATAAGCTGTATCTGGGAATTCAT
TAAAACCTACTCTACTTATTGCTCTTGTCTGAAATTGGAAATAACTTAGA
TTTAACCTTCTCCCTGCTGCCTAACTCTGTAACCAATAGAGAATGGGGTG
GCAAATGGCTACTTCAGTGTGCTAGAGGTTAAGCTTTATTTTTGGCACCT
TTATCAGTGCTTGTATTGTTTTCATCATAATGTCGGCTGGGCTGTTTGTG
TGGGAAAAAAAGAAGACCATAATATTTTTATACAGTACATATAAGTGCAG
ATGATACATACAGTCTGTTCAGCTTGCATGTACCTTGGGAAAATTCCCTA
TAAGGTGTTCTCTGCAAGAACAAGAAATAAAAAACCATCACACATTGTAT
TTAGGTCCCTACAAGGACCCCTGCTCTTTTCAATAGGTCGGTCCATTGAA
GAGACATGGCTGCTG Coding sequence (CDS) from alignment at Sc0000000:1005472..1012536+ >BlTCONS00000146 ID=BlTCONS00000146|Name=BlTCONS00000146|organism=Branchiostoma lanceolatum|type=CDS|length=1569bp|location=Sequence derived from alignment at Sc0000000:1005472..1012536+ (Branchiostoma lanceolatum)
CTGCATGAGCAAGGCTTGAGAGGAGTGCAGCAAGCTCTGATGTCAATCAC
CACGTCGTCAGGTCAACACAGACTGGCCCCTCCCACAGAACAGCTTGCAG
CCTACAATGCCCAGGTGGGTCCCCACATCGAGGAGACGTCAGACCTGGAG
TGGACCGACACCAGCTCCAAACCCGAGTACTTAGTGGGACAGGAGGTCCT
GTACCTGCATCCCTCGGAGTGCTACAACATCCACTGGCCCATGTCCTGTG
GTCAGCTCCACCTGCACAGCGGCCCCGGAGGGTCTCTCACCGCAGTTCTG
GCTGACCTGGAGACCATATGGACCACGGCCATCGAGAAGTTCCTTGACAT
TCCTATCGAGGACCTCAAACACTACAGATGCATCCTGCTTGTCCCAGACA
TCTACAACAGACAGCACATCAAGGAGCTCATTAACCTGCTGCTGAACAGG
CTGGGCTTCTCTGCCGCCATCGCAGATCAGGAGTCTGTGTGTGCGACGTT
CGGAAGCGGGGTGGCCAGTGCCTGCGTTGTGGATGTCGGGGACCAAAAGA
CGGCTGTTTGCTGCGTAGAAGACGGTCTCTCACACAGAAACTCAAGACTA
TGGCTGGACTACGGCGGCAGGGACATCACCAGGTGCCTGGAGTGGCTGCT
GAGGAAAAACAACTTCCCATATAAGGACTGCAACCTGCTGGACAGGCTGG
ACTGTCAGCTGCTGCAGGAGCTCAAGCACTCCTCCTGTCATCTCAACAGG
GACATGTTTGGTGCCCGATGTCAGGACGTCCATGTGCAGAGGCCGGACAC
GTTCACCCGGCGGTACCAGGTCCGGTTAGGGGAGGAAACCATCCAGGCAC
CCATGGGTCTGTTCCACCCCCAGCTGTTTGGGCTGGTCGGCAGCAGTCTG
GTGCACACCCAGCTTAGGAACCAGGGAGACCCGGAGGACGTCCATGACGA
ACACTACCTGCTGCAGACCCAGAGCACGCAGCAACAGGTGGCCAAAGCCG
TGGCAGAGAAGAAAGCCAAGGCGAGCAGTAAGCAGGACCAGGGGGCAGAC
GGGGACAAGACCTCGCCCGACTCCAAACCCAGCCTGGAGCCCAGGCACAA
GAGGGCGCGGGAGGACGCAGGGGGGTCGGAGGCTAAGCATCGCAGGGGGG
TGGTCCGGCTACCCTCTACCTCCCGGAGGGGGGTGGAGCCTCCCCCCCTG
AAACTGATGGGGGTGGACCAGGCCATTCTGCACAGTATAGAGTGCTGTGC
GTCTGACGAGACGAAGAAGAAGATGTTCTCCTGCATCCTGGTGGTGGGAG
GGGGGCTGAACTTCCCGGGCGCGCAGAACTTCCTGCTGCACAGAGTCAGG
TCACANGCGCGCAGAACTTCCTGCTGCACAGGGTCAGGTCACAGCTGCCC
GCCAAGTACCGCAGCATCGCCGACACCATGGAGGTCATCAACAGGCCAAA
GGACCAGGACCCGCAGATGGTGTGCTGGAAGGGAGCGGCCGTCCTGGCGT
GTCTGGACACGACACAGGAGCTGTGGGTGGGGCAGCGCGAGTGGAGGAAG
TTCGGCATCAGGATACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00000146-exon-Sc0000000-1564993656:1005472..1005564 | BlTCONS00000146-exon-Sc0000000-1564993656:1005472..1005564 | Branchiostoma lanceolatum | exon |
| BlTCONS00000146-exon-Sc0000000-1564993656:1005944..1006045 | BlTCONS00000146-exon-Sc0000000-1564993656:1005944..1006045 | Branchiostoma lanceolatum | exon |
| BlTCONS00000146-exon-Sc0000000-1564993656:1006454..1006627 | BlTCONS00000146-exon-Sc0000000-1564993656:1006454..1006627 | Branchiostoma lanceolatum | exon |
| BlTCONS00000146-exon-Sc0000000-1564993656:1007267..1007346 | BlTCONS00000146-exon-Sc0000000-1564993656:1007267..1007346 | Branchiostoma lanceolatum | exon |
| BlTCONS00000146-exon-Sc0000000-1564993656:1007460..1007490 | BlTCONS00000146-exon-Sc0000000-1564993656:1007460..1007490 | Branchiostoma lanceolatum | exon |
| BlTCONS00000146-exon-Sc0000000-1564993656:1007877..1007992 | BlTCONS00000146-exon-Sc0000000-1564993656:1007877..1007992 | Branchiostoma lanceolatum | exon |
| BlTCONS00000146-exon-Sc0000000-1564993656:1008557..1008710 | BlTCONS00000146-exon-Sc0000000-1564993656:1008557..1008710 | Branchiostoma lanceolatum | exon |
| BlTCONS00000146-exon-Sc0000000-1564993656:1009120..1009215 | BlTCONS00000146-exon-Sc0000000-1564993656:1009120..1009215 | Branchiostoma lanceolatum | exon |
| BlTCONS00000146-exon-Sc0000000-1564993656:1009776..1009916 | BlTCONS00000146-exon-Sc0000000-1564993656:1009776..1009916 | Branchiostoma lanceolatum | exon |
| BlTCONS00000146-exon-Sc0000000-1564993656:1010359..1010620 | BlTCONS00000146-exon-Sc0000000-1564993656:1010359..1010620 | Branchiostoma lanceolatum | exon |
| BlTCONS00000146-exon-Sc0000000-1564993656:1010901..1011102 | BlTCONS00000146-exon-Sc0000000-1564993656:1010901..1011102 | Branchiostoma lanceolatum | exon |
| BlTCONS00000146-exon-Sc0000000-1564993656:1011539..1012536 | BlTCONS00000146-exon-Sc0000000-1564993656:1011539..1012536 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000000 | genome | Sc0000000:1005472..1012536 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF000076 |
|
