BlTCONS00000145 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00000145
Unique NameBlTCONS00000145
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000000:1005471..1007842+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00000145 ID=BlTCONS00000145|Name=BlTCONS00000145|organism=Branchiostoma lanceolatum|type=mRNA|length=2372bp|location=Sequence derived from alignment at Sc0000000:1005471..1007842+ (Branchiostoma lanceolatum)
GCTGCATGAGCAAGGCTTGAGAGGAGTGCAGCAAGCTCTGATGTCAATCA CCACGTCGTCAGGTCAACACAGACTGGCCCCTCCCACAGAACAGGTAAGC TGTCAATCACCATGTCGCCAGGGCAACACAGACTGACCACGTCAACAGTA AAGGCTATTTAACTTCTGGCATCCTTTCTCAAGTTCTTCCAATGTAATAT GTTTTGATGATTTTTCTTGAATGGAAGGCTGGCCATTATAGCTATAGAGT GTTGCTTTTGAGATAAAGAGAATGTTGAGTTTCTGCAGCTTGTAGCCTAC AATACACAGGTGGGCCCCCACATTGTTATTAGTACAAATATTGCTGTGAA TGATATACTAGTATCATATCTCCCATGTCTCCAGCTTGCAGCCTTCAATG CACAGGTTGGTCCCCACATTGTTTTAGTACAAATATTGCTGTTAATGATA TATTATATCTCCCATGTCTTCAGCTTGCAGCCTACAATGCCCAGGTGGGT CCCCACATCGAGGAGACGTCAGACCTGGAGTGGACCGACACCAGCTCCAA ACCCGAGTACTTAGTGGGACAGGAGGTGAGCAGACCTGTACCATGTACTA TCTGTAGTCGCGGACTTACTGAGCCTTCCTCTGTATCTAGAGTTCACTGT TCATTGTGTCCTTGTCGAAAAGAGCTAGGGGAATTATTTGGTCAAAGGAA ACTGTATGATACTGTACTAAGCATCTGTCTACTGTTGTTGAATCTTTACA GCCACTCGTCTCGTTGGCTTCTGGCCACTTTGTGCTATGACCCTTCTTCT CTCTCTTCTGTCATGACCAGTGGAAGCTTAGCTCTTCAGTGAGCTAGCTA CGACTGGACTGAGATCACTTTCCTCTTCCCAGTACCACCTTTTCCTCTAG CATCGCAGCCTGTCAATGCCAATGATATAACATTAGCCAAAGCTGTGTTC ATGTTCTTGAACTACATATCTATATCCCCCCAGGTCCTGTACCTGCATCC CTCGGAGTGCTACAACATCCACTGGCCCATGTCCTGTGGTCAGCTCCACC TGCACAGCGGCCCCGGAGGGTCTCTCACCGCAGTTCTGGCTGACCTGGAG ACCATATGGACCACGGCCATCGAGAAGTTCCTTGACATTCCTATCGAGGA CCTCAAAGTAGGCTTCTGTCTTGTAAACTATTTTTTTTCTCCCCTCCATT CATTGCCCGCGTAATGAATATCTGTAAAGTCCTAGGTTATGCTTGGGTCA CATTTTCAATCCGGGGCCCGGCCGGGCAGTGTTTGGGAACAAAATGTATG ATATAAAAGACAACAAAAAACACAAAACGTACCAAAAATTATTCAAGAGC ATAGCTAGTGCATATTTATTGATATACATTTTAATTTTTCGTTTCCGCAA ACAGCCCGGCCGGGCCCCGGTTAGGAAATGTGACCCAAGCATAAGGGGGA AGCACTGTAGATGTGACATTCTTATTAAGCTCAACAAATTTAGCTACAAA CATTTCCAATGCCATCCAACATAATACATTTTTCATTATTGAAAAGAACT TACTATTAGTATTATCAACTATTATTTCAACAATGAAAAATGCTGGATGG GATTTGAAATGTCTACAACTCTCTACATTTGTTTAATGGTTAGATTTGAT CAAAATGTTATTATTCCGTCCTGGATGTCTAACCTTCATAAACGCACTGC ACATATGTTTTTGAGTTATGTTTAACACTACAGATATACATGTATCCATC ATGATGTTTGTTTATTTTTGTTTATTTGTTTTTATTTATTTTTCAGCACT ACAGATGCATCCTGCTTGTCCCAGACATCTACAACAGACAGCACATCAAG GAGCTCATTAACCTGCTGCTGAACAGGCTGGGCTTCTCTGCAGCCATCGC ACATCAGGTGGGCTGTCAATCAATCAACCAGTCAATCAATCAATCAATCA ATTGGTCATATTTAAAGTCATTAACCTGCTGCTGAACAGGCTGGGCTTCT CTGCCGCCATCGCAGATCAGGTGGGCTGTCAGTTAGTCCATCCCTCCATC CGACCGTCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCA TCCATCTGTTACTATTTTTGTCAACTGGTCAACCAGATGTACATAATTTC TGAAATGTACATAATCTCCCATATCTTAGACTGCTGATGTTGAGTTGAAA CCCTTTTCTTCATTAGTACTAGTAGTGTGCATGTGGTAATGTGTCAGGCG GCTGTTGGACTGTGTCTGTGACCCCTTGCAGGAATCAGTTTTGGTATTAG GTTACTACAAATGTATCTGTTTACAGGAGTCTGTGTGTGCGACGTTCGGC AGCGGTGTGGCGAGTGCCTGTG

Coding sequence (CDS) from alignment at Sc0000000:1005471..1007842+

>BlTCONS00000145 ID=BlTCONS00000145|Name=BlTCONS00000145|organism=Branchiostoma lanceolatum|type=CDS|length=525bp|location=Sequence derived from alignment at Sc0000000:1005471..1007842+ (Branchiostoma lanceolatum)
CTGCATGAGCAAGGCTTGAGAGGAGTGCAGCAAGCTCTGATGTCAATCAC
CACGTCGTCAGGTCAACACAGACTGGCCCCTCCCACAGAACAGCTTGCAG
CCTACAATGCCCAGGTGGGTCCCCACATCGAGGAGACGTCAGACCTGGAG
TGGACCGACACCAGCTCCAAACCCGAGTACTTAGTGGGACAGGAGGTCCT
GTACCTGCATCCCTCGGAGTGCTACAACATCCACTGGCCCATGTCCTGTG
GTCAGCTCCACCTGCACAGCGGCCCCGGAGGGTCTCTCACCGCAGTTCTG
GCTGACCTGGAGACCATATGGACCACGGCCATCGAGAAGTTCCTTGACAT
TCCTATCGAGGACCTCAAACACTACAGATGCATCCTGCTTGTCCCAGACA
TCTACAACAGACAGCACATCAAGGAGCTCATTAACCTGCTGCTGAACAGG
CTGGGCTTCTCTGCAGCCATCGCACATCAGGAGTCTGTGTGTGCGACGTT
CGGCAGCGGTGTGGCGAGTGCCTGT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000145BlTCONS00000145-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000145-exon-Sc0000000-1564993656:1005471..1005564BlTCONS00000145-exon-Sc0000000-1564993656:1005471..1005564Branchiostoma lanceolatumexon
BlTCONS00000145-exon-Sc0000000-1564993656:1005944..1006045BlTCONS00000145-exon-Sc0000000-1564993656:1005944..1006045Branchiostoma lanceolatumexon
BlTCONS00000145-exon-Sc0000000-1564993656:1006454..1006627BlTCONS00000145-exon-Sc0000000-1564993656:1006454..1006627Branchiostoma lanceolatumexon
BlTCONS00000145-exon-Sc0000000-1564993656:1007267..1007377BlTCONS00000145-exon-Sc0000000-1564993656:1007267..1007377Branchiostoma lanceolatumexon
BlTCONS00000145-exon-Sc0000000-1564993656:1007797..1007842BlTCONS00000145-exon-Sc0000000-1564993656:1007797..1007842Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000000genomeSc0000000:1005471..1007842 +
Properties
Property NameValue
GeneIDBlCUFF000076