BlTCONS00000138 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00000138
Unique NameBlTCONS00000138
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000000:991832..996925+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00000138 ID=BlTCONS00000138|Name=BlTCONS00000138|organism=Branchiostoma lanceolatum|type=mRNA|length=5094bp|location=Sequence derived from alignment at Sc0000000:991832..996925+ (Branchiostoma lanceolatum)
TGAAAGTGGTAACTACATTTTGTACATCTGTGAATAGTTTATCTCTTATA TGTCAATGAAGGTTAGACATCCAGGTAGCTAATAAGATAAGCAAGATAAC AGTTCAAGCAAAATTATGGATACATTTGGGAAGGGTCAGATATTTTAGAC AGCATCCGCTGATTTTTGTCAGTGACTAAATGAAAACTGTTTCCATACCT CATACTAGTATATTGTTTTTATTTTGAAGATTCTAGTTCTAAAGTAGAAG AGATACCCTCCATAGCAGGCTTATGAGTTTTTGTTATTATAACTTATATG CTGTTTTATTATTGAATGCCAAAAATCATTGTTGTATCTGTATCTATATA GCCGGTATTGTCGCACGTGTAACATTGTTACCTGTTATTTGTGTTACACA TTGTTATTTATGTCACACAGGAGAGATAGACGATGAAGCTGATGTTGACC AGGACAAAGACTGGGCGTCCTACTGGCGACTGCTGTTGTCACACATGTAA CATTGGTACCTGTTGTTTATGTCACACAGGAGAGATAGACGATGAGGCCG ATGTTGACCAGGACAAAGACTGGGCATCCTACTGTCGCCTACTGTTGTTG CATGTGTAACATTGTTCCTATTGTTTATGTCACACAGGAGAGATAGACGA TGAGGCTGATGTTGACCAGGACAAAGACTGGGCGTCCTACTGGCGACTGC TGTTGTCGCACGTGTAACATTGGTACCTGTTGTTTATGTCACACAGGAGA GATAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNGATGTTGACCAGGACAAAGACTGGG CGTCCTACTGGCGACTGCTGTTGTCACACATGTAACATTGGTACCTGTTG TTTATGTCACACAGGAGAGGTAGACGATGAGGCCGATGTTGACCAGGACA AAGACTGGGCGTCCTACTGGCGACTGCTGTTCCCACAAGTCACCCTGCAG GCTATCCTGGAGTTTGAGAAGAAGTACAAAGGTAGGACAGTCAGAGCACC GTCTTGTGTTTGCTTTCATCTGGATCAAATTCTATGGGCCTGAGTTTGAT CCTAGGGTCGGCCTGAGCTCAAACATGTTGTAAGTAGTACTGTGTACCTA ATCCTAAATGAAACATCAGGTACAGGTACCGGTACAGAGGTTTAGGTACA GATCTGTACCTGTACCTGTACCTGAACATCTTCAATAATGACAGAAACAT AAATAAACTTTTTTAACTTGTCAGTATCTTTATACAAAGAACATAACTAG GACTTACTGCCAAACTCCCTTGGCCTTGCTATCAAAACTCCCGGCCCTCC TGAATGATCTGTTGCATATTAGTTACACTGTTCCAAGGTGTCACTTTGGT CACATTTGGTGTTGCATGAGGCCATGAGGTTAGGAATCAGTCACAAAATA AGCACATACTTGATGTAAATTTATATCGGTACAGTACCGGCACTTCATGA TTTAGTATTTTGGACCTGTACCTAATCAATTTTTACGGTACAATACCAGT ACATAGTACGGGTACGCAGCACTAGTTGTAAGGGATTGCATTCCTCACTT CTGATGATGGCATAAGGCCGGCGGTCCCGTGTATGCAGAAGCTTCAGGCA AAAGCCTCAAGCATCAAACCTCTTGCCGTAAAAGAACCCAAGAAGAGCTT GGCTACATATGCGAGCCATAGCAAAGACGCATTGCACTACTTGCTAACAA AGAAGCTTTGTGCTCAGTCTGACTAACCTGAAGAGACAGTGCAGTGATTA CTGTAAATGCATTCAAGTTCACATGGTTTCAATTTCAGGGTAGGGAGAAA ATGATGTGTTTACGTTCGTTTTTAATTAACGTTTGAAACAATAGAAGCAC TACAGAAGCACCGACTGAATATTTTGGGGTCGTAATAAGTTCACGACGAA AAGCTTACCACAAAAACCGCGAACATAAAACCACCGCAAACATTTCTGCA TTTACAGTAGCCTAAATTTTTTATCCCATTTTTGCGTTTCCTATGTTCAG GTTCAGAAGAGGAACTTGAAGAGCTGACAGCGGCGTACCAGGAACACGAG GGGGACATGGACGCCATCATGGAGTCCGTTACCCTGGCAACGATGGAGGA TGAGCCTCGGTTCCGTCGGCTGCTGCAGGATCAGGTCAGCTCGGGCGCGC TGTCGGACTTCCCCGCCTTCTCACAGGAGCAGAGGAGCAAGAAACAGCAC AGGAAACGCAAGGCAAGGATGAGGGGTTGTTTGTTTGTTGCATCAGAATG CGACGAAAAGATATGAAAGAGATGGATGATAAGAGAGTACAATGATAAGA GAGGGTTTTGCTAGCCGTAAATTTCTTTCAGTTATCGGAACATGCTCACC TCCCGGTATCGTCTGACCATAATGTAACATTTTCATGCTAGACAATGACA GGATGGCCATAAGCTTGTCTGTCATTAGCAAGAAGAAAGACTGGTACTAG GCAAAACCCTGGTTGGAGACCAGCTCTCTCTGAGTTAGCTGAATAGATAA CATTTTCGTGCTCCATTTTTGTTGTCATCAACTTTAAATGCTCCACTTCT GATGATNACTTTTTGCACTCCATTTTTGTTGTCATCAACTTCTGATGATA TCATCACAAATTTTCATGCTACACTATTGATAATGTCATCAGAGCTTATT GTGCTCCATCTATGATGATGTCATCACAACTAACTGTGCCCCATTTCTGA TGATGTCATCACGTTTTCCCTCTCCAGGCTAAGAAAGAGGCGAAGGAGGC GGAGGCGGCGAGAAAAGAGCTCGGGATGGACGACTCGGAAGACGCTTTAA AGAAGATGATCGCACAGCGGAGCCAGAGCAGGGAGAGTGGGTTTAACAGC TTCATGGCCGACCTTGAGGCCAGATACGCGCCCAAGGGCAAGAAGACAAA GAAGGGGAAAAAGTGATCAGTGGTTACAACGTAAAAATAAAGAACAATTT GCTGGGAAACTGACTTTTTCTCTCAAAATCTTTCTTTTTTGTTTATGATC TGCTTGGAGGTTAGTAAGCATTGCCCTGAGGCTAGGTAGGGGGTTTCTAG ATCCATGATGAAGGCCTGTCCTGATGACTAGATGTGTGGGTTGCTGATAC TCACAACACCGCTGAGACTCCTGCAGCATGATTGAAACACGCTAGGTGCC ACTGGCATCAATTGTACTAAGATATGAATCAATACACTTTACTTACTGTG CCGTATGTGATGTCAGCACTTTTGTTGGAAATATGTTCATGTTTTCATGG CATACCTGGAGGCCAAATATGCACCTATCAAAGGGCAAGAAAACCAAGAG GGGGAATAGTTGATCAGCACTAAAGGTGGAAACAAAAGAACACTGCTGGG AAACTTCAACTTTTCTCTCAAAATCTTTTCTGTTCAAGTTGTATGCATTT CCCTGAGGCTATTTAGGGGGCTTCTAAATCCTCAATACAGCCTTGTCTTG ATGACGAGATGTGTGGGCTGCTGATACTTATTTGCCCTCTCAGAGCCCTG CAACATGATAAGTAGATATTTAACACATTCTATATAGGCACTACTGTTAT CACCTAACATTAAGATATTTCAGTAGCCTTTACTTACTGTGCCACATATG ATGTGAGCACATTTGTTGGAAAAATGTTTATAAATAGTAAAGTGAAAGCG TTTTTATTATTATTGTTATGTTTCTTTGTTGAAATAAAACCTGG

Coding sequence (CDS) from alignment at Sc0000000:991832..996925+

>BlTCONS00000138 ID=BlTCONS00000138|Name=BlTCONS00000138|organism=Branchiostoma lanceolatum|type=CDS|length=528bp|location=Sequence derived from alignment at Sc0000000:991832..996925+ (Branchiostoma lanceolatum)
GAAAGTGCAGGAGAGATAGACGATGAGGCCGATGTTGACCAGGACAAAGA
CTGGGCGTCCTACTGGCGACTGCTGTTCCCACAAGTCACCCTGCAGGCTA
TCCTGGAGTTTGAGAAGAAGTACAAAGGTTCAGAAGAGGAACTTGAAGAG
CTGACAGCGGCGTACCAGGAACACGAGGGGGACATGGACGCCATCATGGA
GTCCGTTACCCTGGCAACGATGGAGGATGAGCCTCGGTTCCGTCGGCTGC
TGCAGGATCAGGTCAGCTCGGGCGCGCTGTCGGACTTCCCCGCCTTCTCA
CAGGAGCAGAGGAGCAAGAAACAGCACAGGAAACGCAAGGCTAAGAAAGA
GGCGAAGGAGGCGGAGGCGGCGAGAAAAGAGCTCGGGATGGACGACTCGG
AAGACGCTTTAAAGAAGATGATCGCACAGCGGAGCCAGAGCAGGGAGAGT
GGGTTTAACAGCTTCATGGCCGACCTTGAGGCCAGATACGCGCCCAAGGG
CAAGAAGACAAAGAAGGGGAAAAAGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000138BlTCONS00000138-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000138-exon-Sc0000000-1564993656:991832..991839BlTCONS00000138-exon-Sc0000000-1564993656:991832..991839Branchiostoma lanceolatumexon
BlTCONS00000138-exon-Sc0000000-1564993656:992358..992377BlTCONS00000138-exon-Sc0000000-1564993656:992358..992377Branchiostoma lanceolatumexon
BlTCONS00000138-exon-Sc0000000-1564993656:994113..994212BlTCONS00000138-exon-Sc0000000-1564993656:994113..994212Branchiostoma lanceolatumexon
BlTCONS00000138-exon-Sc0000000-1564993656:995232..995443BlTCONS00000138-exon-Sc0000000-1564993656:995232..995443Branchiostoma lanceolatumexon
BlTCONS00000138-exon-Sc0000000-1564993656:995959..996925BlTCONS00000138-exon-Sc0000000-1564993656:995959..996925Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000000genomeSc0000000:991832..996925 +
Properties
Property NameValue
GeneIDBlCUFF000072