|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000000:990644..996925+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00000134 ID=BlTCONS00000134|Name=BlTCONS00000134|organism=Branchiostoma lanceolatum|type=mRNA|length=6282bp|location=Sequence derived from alignment at Sc0000000:990644..996925+ (Branchiostoma lanceolatum)
AATACTGACCCGCCGCTAGGTGTCTCTCATTCCGCGTCCATATGCCTGAA
CATCTGAACAGAGAAGATTGCGCCCCAGCCTCGGGCAAGCAATTTTGGAA
CAACTTTGGAACAACCGCGCCACGTGATTGGTCGAGAGCCCAAAGTTAGA
ACTCTCAGCTTGGCAGTGAGTGTGCGTGTCCTTGCGCAGGGGCCATGCTA
CTTCGAAGACAAAGGAAAATGATTTAGCTCTATTCAATGTGCAATCTGAC
GCGATTTAGTGCCGTGTAACTTCGTAAATATGTCCTTGGTCACTGTGGTA
CAGACCAGGAAACAGTTGAGTACTTTGGGTCAGAGTTTAAAGGTCATAAC
TTCCCATCAACCTCTTGGACATTTCGCGCCATTTTGAAAAAAAAGAGCGA
AGAACAGAAGAGAGTTCTGTTCCGAGAAATCGTCCCGTACCTGCTCACCC
GTCCTCACCTGTCCTCACCTGCACTATGCCGGGACTTCTGCAGACCTGTG
AGGAGCTGTTCGACACCCGTGACCTTTACAAGGTCATAGGAGTGGAGAAC
ACCGCGTCAGAAAAGGAAGGTAAGATGGGGGAGGGGGGCACATGTTTGTA
AAATGAATGAAGGCCATTATTTATAATGTTGTAGCCCGGTATTAAAACCT
ATTACAGTTAGCTATCGAGTCTTCTCTCCGCAGATTACTCGGGAGGTACA
ATAGGTTTGGATACACAGGCACACACAGACACACACAGACACACACATAC
ATACATACACACAAACATGTACTCACACAGTCAAAGGCACACACAGAGAG
ACACAGACGCACACACAGTGAAAGGCACACACAGAAGGCATACACATACA
CACATAGGCAGGCACACAGGCACACACACACACCAACACACACACAGTCA
AAGGCACAGACAAGACACACACACACACACACCAACACACACAGTCAAAG
GCACAGACACACACACAAACACACACAGGCACACTTACCCACCCAAATAT
GTAACCTTCATATAACCAAATATGTAACCTGTTTTTCCTGTTGTTGCAGT
GAAGAAGGGTTACTACAGGATGTCCATGAGATTTCACCCCGACCGGAACT
CCGATGACGAGAAGTCCACAGAAAAGTTCCAGGCTCTCAGCAAAGTCTAC
TCCATCTTGTCCGACAGTGGGAAGAGAGCCCTGTATGATGAAAGTGGTAA
CTACATTTTGTACATCTGTGAATAGTTTATCTCTTATATGTCAATGAAGG
TTAGACATCCAGGTAGCTAATAAGATAAGCAAGATAACAGTTCAAGCAAA
ATTATGGATACATTTGGGAAGGGTCAGATATTTTAGACAGCATCCGCTGA
TTTTTGTCAGTGACTAAATGAAAACTGTTTCCATACCTCATACTAGTATA
TTGTTTTTATTTTGAAGATTCTAGTTCTAAAGTAGAAGAGATACCCTCCA
TAGCAGGCTTATGAGTTTTTGTTATTATAACTTATATGCTGTTTTATTAT
TGAATGCCAAAAATCATTGTTGTATCTGTATCTATATAGCCGGTATTGTC
GCACGTGTAACATTGTTACCTGTTATTTGTGTTACACATTGTTATTTATG
TCACACAGGAGAGATAGACGATGAAGCTGATGTTGACCAGGACAAAGACT
GGGCGTCCTACTGGCGACTGCTGTTGTCACACATGTAACATTGGTACCTG
TTGTTTATGTCACACAGGAGAGATAGACGATGAGGCCGATGTTGACCAGG
ACAAAGACTGGGCATCCTACTGTCGCCTACTGTTGTTGCATGTGTAACAT
TGTTCCTATTGTTTATGTCACACAGGAGAGATAGACGATGAGGCTGATGT
TGACCAGGACAAAGACTGGGCGTCCTACTGGCGACTGCTGTTGTCGCACG
TGTAACATTGGTACCTGTTGTTTATGTCACACAGGAGAGATAGANNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNGATGTTGACCAGGACAAAGACTGGGCGTCCTACTGGC
GACTGCTGTTGTCACACATGTAACATTGGTACCTGTTGTTTATGTCACAC
AGGAGAGGTAGACGATGAGGCCGATGTTGACCAGGACAAAGACTGGGCGT
CCTACTGGCGACTGCTGTTCCCACAAGTCACCCTGCAGGCTATCCTGGAG
TTTGAGAAGAAGTACAAAGGTAGGACAGTCAGAGCACCGTCTTGTGTTTG
CTTTCATCTGGATCAAATTCTATGGGCCTGAGTTTGATCCTAGGGTCGGC
CTGAGCTCAAACATGTTGTAAGTAGTACTGTGTACCTAATCCTAAATGAA
ACATCAGGTACAGGTACCGGTACAGAGGTTTAGGTACAGATCTGTACCTG
TACCTGTACCTGAACATCTTCAATAATGACAGAAACATAAATAAACTTTT
TTAACTTGTCAGTATCTTTATACAAAGAACATAACTAGGACTTACTGCCA
AACTCCCTTGGCCTTGCTATCAAAACTCCCGGCCCTCCTGAATGATCTGT
TGCATATTAGTTACACTGTTCCAAGGTGTCACTTTGGTCACATTTGGTGT
TGCATGAGGCCATGAGGTTAGGAATCAGTCACAAAATAAGCACATACTTG
ATGTAAATTTATATCGGTACAGTACCGGCACTTCATGATTTAGTATTTTG
GACCTGTACCTAATCAATTTTTACGGTACAATACCAGTACATAGTACGGG
TACGCAGCACTAGTTGTAAGGGATTGCATTCCTCACTTCTGATGATGGCA
TAAGGCCGGCGGTCCCGTGTATGCAGAAGCTTCAGGCAAAAGCCTCAAGC
ATCAAACCTCTTGCCGTAAAAGAACCCAAGAAGAGCTTGGCTACATATGC
GAGCCATAGCAAAGACGCATTGCACTACTTGCTAACAAAGAAGCTTTGTG
CTCAGTCTGACTAACCTGAAGAGACAGTGCAGTGATTACTGTAAATGCAT
TCAAGTTCACATGGTTTCAATTTCAGGGTAGGGAGAAAATGATGTGTTTA
CGTTCGTTTTTAATTAACGTTTGAAACAATAGAAGCACTACAGAAGCACC
GACTGAATATTTTGGGGTCGTAATAAGTTCACGACGAAAAGCTTACCACA
AAAACCGCGAACATAAAACCACCGCAAACATTTCTGCATTTACAGTAGCC
TAAATTTTTTATCCCATTTTTGCGTTTCCTATGTTCAGGTTCAGAAGAGG
AACTTGAAGAGCTGACAGCGGCGTACCAGGAACACGAGGGGGACATGGAC
GCCATCATGGAGTCCGTTACCCTGGCAACGATGGAGGATGAGCCTCGGTT
CCGTCGGCTGCTGCAGGATCAGGTCAGCTCGGGCGCGCTGTCGGACTTCC
CCGCCTTCTCACAGGAGCAGAGGAGCAAGAAACAGCACAGGAAACGCAAG
GCAAGGATGAGGGGTTGTTTGTTTGTTGCATCAGAATGCGACGAAAAGAT
ATGAAAGAGATGGATGATAAGAGAGTACAATGATAAGAGAGGGTTTTGCT
AGCCGTAAATTTCTTTCAGTTATCGGAACATGCTCACCTCCCGGTATCGT
CTGACCATAATGTAACATTTTCATGCTAGACAATGACAGGATGGCCATAA
GCTTGTCTGTCATTAGCAAGAAGAAAGACTGGTACTAGGCAAAACCCTGG
TTGGAGACCAGCTCTCTCTGAGTTAGCTGAATAGATAACATTTTCGTGCT
CCATTTTTGTTGTCATCAACTTTAAATGCTCCACTTCTGATGATNACTTT
TTGCACTCCATTTTTGTTGTCATCAACTTCTGATGATATCATCACAAATT
TTCATGCTACACTATTGATAATGTCATCAGAGCTTATTGTGCTCCATCTA
TGATGATGTCATCACAACTAACTGTGCCCCATTTCTGATGATGTCATCAC
GTTTTCCCTCTCCAGGCTAAGAAAGAGGCGAAGGAGGCGGAGGCGGCGAG
AAAAGAGCTCGGGATGGACGACTCGGAAGACGCTTTAAAGAAGATGATCG
CACAGCGGAGCCAGAGCAGGGAGAGTGGGTTTAACAGCTTCATGGCCGAC
CTTGAGGCCAGATACGCGCCCAAGGGCAAGAAGACAAAGAAGGGGAAAAA
GTGATCAGTGGTTACAACGTAAAAATAAAGAACAATTTGCTGGGAAACTG
ACTTTTTCTCTCAAAATCTTTCTTTTTTGTTTATGATCTGCTTGGAGGTT
AGTAAGCATTGCCCTGAGGCTAGGTAGGGGGTTTCTAGATCCATGATGAA
GGCCTGTCCTGATGACTAGATGTGTGGGTTGCTGATACTCACAACACCGC
TGAGACTCCTGCAGCATGATTGAAACACGCTAGGTGCCACTGGCATCAAT
TGTACTAAGATATGAATCAATACACTTTACTTACTGTGCCGTATGTGATG
TCAGCACTTTTGTTGGAAATATGTTCATGTTTTCATGGCATACCTGGAGG
CCAAATATGCACCTATCAAAGGGCAAGAAAACCAAGAGGGGGAATAGTTG
ATCAGCACTAAAGGTGGAAACAAAAGAACACTGCTGGGAAACTTCAACTT
TTCTCTCAAAATCTTTTCTGTTCAAGTTGTATGCATTTCCCTGAGGCTAT
TTAGGGGGCTTCTAAATCCTCAATACAGCCTTGTCTTGATGACGAGATGT
GTGGGCTGCTGATACTTATTTGCCCTCTCAGAGCCCTGCAACATGATAAG
TAGATATTTAACACATTCTATATAGGCACTACTGTTATCACCTAACATTA
AGATATTTCAGTAGCCTTTACTTACTGTGCCACATATGATGTGAGCACAT
TTGTTGGAAAAATGTTTATAAATAGTAAAGTGAAAGCGTTTTTATTATTA
TTGTTATGTTTCTTTGTTGAAATAAAACCTGG Coding sequence (CDS) from alignment at Sc0000000:990644..996925+ >BlTCONS00000134 ID=BlTCONS00000134|Name=BlTCONS00000134|organism=Branchiostoma lanceolatum|type=CDS|length=759bp|location=Sequence derived from alignment at Sc0000000:990644..996925+ (Branchiostoma lanceolatum)
ATGCCGGGACTTCTGCAGACCTGTGAGGAGCTGTTCGACACCCGTGACCT
TTACAAGGTCATAGGAGTGGAGAACACCGCGTCAGAAAAGGAAGTGAAGA
AGGGTTACTACAGGATGTCCATGAGATTTCACCCCGACCGGAACTCCGAT
GACGAGAAGTCCACAGAAAAGTTCCAGGCTCTCAGCAAAGTCTACTCCAT
CTTGTCCGACAGTGGGAAGAGAGCCCTGTATGATGAAAGTGGAGAGGTAG
ACGATGAGGCCGATGTTGACCAGGACAAAGACTGGGCGTCCTACTGGCGA
CTGCTGTTCCCACAAGTCACCCTGCAGGCTATCCTGGAGTTTGAGAAGAA
GTACAAAGGTTCAGAAGAGGAACTTGAAGAGCTGACAGCGGCGTACCAGG
AACACGAGGGGGACATGGACGCCATCATGGAGTCCGTTACCCTGGCAACG
ATGGAGGATGAGCCTCGGTTCCGTCGGCTGCTGCAGGATCAGGTCAGCTC
GGGCGCGCTGTCGGACTTCCCCGCCTTCTCACAGGAGCAGAGGAGCAAGA
AACAGCACAGGAAACGCAAGGCTAAGAAAGAGGCGAAGGAGGCGGAGGCG
GCGAGAAAAGAGCTCGGGATGGACGACTCGGAAGACGCTTTAAAGAAGAT
GATCGCACAGCGGAGCCAGAGCAGGGAGAGTGGGTTTAACAGCTTCATGG
CCGACCTTGAGGCCAGATACGCGCCCAAGGGCAAGAAGACAAAGAAGGGG
AAAAAGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00000134-exon-Sc0000000-1564993656:990644..991212 | BlTCONS00000134-exon-Sc0000000-1564993656:990644..991212 | Branchiostoma lanceolatum | exon |
| BlTCONS00000134-exon-Sc0000000-1564993656:991693..991839 | BlTCONS00000134-exon-Sc0000000-1564993656:991693..991839 | Branchiostoma lanceolatum | exon |
| BlTCONS00000134-exon-Sc0000000-1564993656:994096..994212 | BlTCONS00000134-exon-Sc0000000-1564993656:994096..994212 | Branchiostoma lanceolatum | exon |
| BlTCONS00000134-exon-Sc0000000-1564993656:995232..995443 | BlTCONS00000134-exon-Sc0000000-1564993656:995232..995443 | Branchiostoma lanceolatum | exon |
| BlTCONS00000134-exon-Sc0000000-1564993656:995959..996925 | BlTCONS00000134-exon-Sc0000000-1564993656:995959..996925 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000000 | genome | Sc0000000:990644..996925 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF000072 |
|
