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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000000:778439..785072+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00000103 ID=BlTCONS00000103|Name=BlTCONS00000103|organism=Branchiostoma lanceolatum|type=mRNA|length=6634bp|location=Sequence derived from alignment at Sc0000000:778439..785072+ (Branchiostoma lanceolatum)
CAGATACCTGGGCGGAAATGGCGCGGACCCCAACCTGCGCCTGCGGAATG
CTGGGAAGGATGACGCAGGCATGTACACGTGCGTGGCCGATCACGAGGCG
AGGCAGGGCAGGGCCAGTCTCAAGTTAGAGGTGCTCTGTGAGTAGATATT
TGTTTGTTTGGAGAGGCAGGGCAGGGCCAGTCTCAAGTTAGAGGTGCTCT
ATGAACAGATATTTGTCTGTATGTTTGTTCGTTTGTTTGTTTTTGTGAGG
TTAGGGGTGCCAGTTTTAGAGTACAGGAACCTTGTGAGTGGACATGTATT
CGTTCGTTCGTTTGTATATTTTGGAAAAGCAGTAAGTGGTTTATTGGAGT
CTATGAAGGAGAAGGCGATTTTCAAGTTTAAGAGCTAGGAGCTTGGTAGT
AGATTTTTATTGACTTTTCGTTGTGATAGCGAGGATAAATGTCAAGCTGT
CAGCTAAATCTAGAAAGGAACACTTTGCTAATTCTTGAATTCTTCACGTG
CGCGTTTTCCTCTCAGATCCGCCCACCATAATCCACATCTCGGGATCGCT
CACCATGGCGTCCGGCGACTCCGTCAAGCTGTACTGTCGGGCAGACGGCT
ACCCCAAACCGGTCATCAGGTACTGTTGAACTCTAACCTATAATTTAAAA
CCCGTTATCAGGTACTGCTGCACTTCAACCTTTAACCTCAAACCGGTCAT
TAGATACTCATGCACTTTCACCTTTAACATTAAACCGGTCATCACGTGCT
ACTGCACTTTCAACATCGGGACAAGAATTTTCTTGTAATAAGTCCGTTCA
CAATCGAATTGCGCGTTTCGAGATGCACTTTTTAGATCAAAATTGAAGGT
CATTAGATATAGTCAAAATACGTCTGGACATGTATTTCTAAGTGAGGAGC
CTGATATAAACACCGTTTATTTTCCTGCGCAAGTGCAGTTCGAACCATGA
ACCAGCATATTCACAAAACAAAATATCTTTTGATATTTGAAACAGCGAAA
TGAACGCTGCTTGAAAGAAAAACAAAACAAATTTGCCTCTGAACTTCCCC
AGGTGGTTGAAGGAGGGGCTTCTGCTGCCGACTGACCTTCAAACTTCAAC
AGGAGAGGTCAGCATGATGACCTTGTCCAACCTCAACATCAACGACAGCG
GCCAGTACGCATGCTCCGCCAGCAATGACGTCGGCAGCGCGGACGCCAAA
ACGCTGAGGCTTACTGTGCAAGGTGAGGGTTAACGCGTTATGTTACGTCA
CTAGTGTGAGAGGTCAGTTCCGTGATGTCATTGCGACAGGTCAGTTCCGT
TGCCGACAGAGAATGTTCGTCCACTCAATTGCATAAAAAAACCCAAAGCG
CCTGAACCTGTGGCAAAAGGCAGTCAGGCCTATTAAGTGCGTGCTATTGG
AGATGATAAAAACTTTTGGGCGATTCTTCCGACGAAGATCAGGATCTCTG
CCAGTAAAATCTGTGACAATCTCTGTGGATCGTGATCTCTTGTCGATAGA
ATCCTCGATTCTGCCAGATTGCAACCTCTACCCTAACATTTGCTTCCCAC
GCCTGCAGACATAGTGGCCCCTCTGCGCCGGCCTGCCTGTAATACTAACC
TCGGCTCTGTGATACTGACATTTGCCCTGTAATACTGACCTTTGCCCTGT
GACACTGACATTTGCCCTATAATAATGATCTTTGCCCTGTGACACTGCCA
TTTGCCCTGTAATAATGACCTTTGCCCTGTGACACTGACATTTACCCTGT
AATAATGACCTTTGCCCGGTGACACTGGCATTTGCCCTGTAATTCTGACC
TTTGCCCTGTGACACTGACCTCTGTCCTGTAATACTGACCTTTGCCCTGC
ACCTGCAGACATGGTGGCCCGGCAGAGCTCCGGGAAGAAAGGCAGCTCCA
CGCGGACCGCCATCATCGCCGGGGCCGTCGCGGGGGGTCTGTGGCTGCTG
CTGTGCCTCGTGCTGCTCATCATCTGGGCCAGGTGAAGATGCTGAATTTC
ATTTCATCTAGATCAATTCGCCACAAAACAGGGCCCATTGAGAGCCTCTC
AGACCCTTTGCGTTACACTGACCGGATGTTGTGATGACAGATGTTTGTTC
CCCTATGACCTGAAAAGTTTCAATTTATCATAAAACCCACCAATTTGATG
ACTCCTCCCTGCAGGCGGCGTCGGGAGCGTCTGAAGAAGCGCGCCAGGAA
CCCGCCGTACTACTCCGTCGGCATGAAGGAGTTCGACTACTACCCCAGAG
GGAGGCAGTCCATAGACAAGGACAGCGGTGCCGTGCGGTACCTCACGGAC
TCACACAGCGACATGGGTAAGTACGGTACAGGGGGAGGCAGTCCATAGAC
AAGGACAGCGGGGCCGTGCGGTACCTCACGGACTCACACAGCGACATGGG
TAAGTACGGTACAGGGGGAGGCAGTCCATAGACAAGGACAGCGGTGCCGT
GCGGTACCTCACGGACTCACACAGCGACATGGGTAAGTACGGTACAGGGG
GAGGCAGTCCATAGACAAGGACAGCGGGACCGTGCGCTACCTCACGGACT
CCCACAGCGACATGGGTAATGATGAGACGTTAGATTTTTCCTACATCGCG
TATGTATTAGTATGTCGTAGTATGTCATATCTATCAAGTCTACTCAGAAC
TTGGACAGCCAGAAAGGCCTACAGTGAATATTTAAGGGCTATTGTATGAA
AGTGTGGGTACATGTGACGTCATGTGTGGAGATATTGTTGTGGGCGGGTA
CATGTGACGTCATGTGTGGAGATAGGGTTGTGGGCGGGTAGTTGTGACGT
CATGTGTGGAGATAGGGTTGTGTGTGGGTACATGTGACGTCATGTCTTGT
TTCCCGGCAGGCCTAGGTGCGACGGTGCCGCTGGCTGTGGGTACATGTCG
TCATGTGTGGAGTTCGAGCTGTGTGCATGTGTGGGTATAGATGACGTCAT
GTGTGGAGATAGAGTTTATGTGTGGGTACATGTACATGTGACGTAATGTG
TTGTTTTCCCGTCAGGCCTCGGTGCGACCGTGCCGCTAGCTGTGGAGTAC
AACAACAAACGGGACAACAGGAAATCCGGGGACGGGGATTCAGGTGAGAC
GGGATCAAATCACAATTATCTATTCCCCATTGTTAATTGATGATTTGTAT
CATTTATTGTGACGTTGGAAAGGTTCGCTAAGGTCCTGTACTGGCTGTAG
ACCTATGTCCCCACAAAGGTCATAGATTTGTTCATACGTACCCTCGTTTA
TCAATAGTAGTTGGTAATTAATTATTGATGATTATCGGTTATTGATACTC
AGTGACGTGGCCAACAGACGTTACAGAATTTTATTGATCGATTGATAACC
TACTATTGATTGGTTATCAGTGACGTGGTACAGGTTTGCGAAGGTGCTAT
ACACGTACGATGGACATTGCAGATGTGTTCAATTGATAACTATTGATAAA
AAGATTGATTGTCATTCATTTGTTGATTGATTCTAGTGACGTGGCGCAGG
TTCGCTAAGGTGCTGTACACGCGCGTGCCGACAGACGAAGACATTACTTC
TTGTCTTTAATGATAATGAATTAGTGATTGATTCGTTATTGACTGATTAT
TGATCATCTATTATTGATTGATCCCAGTGACGTGGCGCAGGTTCGCGAAG
GTCCTCTACACGTACGTCCCCACGGATGAGGACGAGTTGCGGCTGCAGTC
CGGTGACGTAGTGGAGGTCCTGAAGGGGGAGGGGGGCGGATGGTGGTACG
GAAAACTCAACGGCAAGGCGGGGCTGTTCCCCTCCAACTACGTGGAAATC
ATCAATCTGAACGGTAGGCTTATGTATTTAAAGTTTACAAGTTTTATTCA
CGTTCGACACGGGTGTTCCAGACTGCCGGGCGATATATTGGGTTATCACA
TGGGATCCTACTTGTGTCACACGAGCTTCCATCGGATCGATAATTCGAAC
GCACTTCCAGTGCACCTATTTTCCCTCTATCTACATGGAAATCATCTACC
TTAACGGCAGGCAATTAATATATCTTAATTGTACAAGTCACAGTTTCTAT
ACTCACCAATGGGGGGGGGGGGTCATATTGCCTGAAGATGGTCGGAGTCA
CTGTCGAAATTGATTCTTAATCCTGTGTTGGATTTAAAGCAATTTCTAAT
AAAAAGATACCCTTCTCACTGTTACCAAACTAAATATAAAAATAGATAAG
AAATAATAAAGGATGCATCCATCCTGTTGCCAACACCTCTCAGATTTCAT
TCTGTGAAGTTTGATAAATAGATAAGTAAATAAAATGTCTCTTTTCTCTC
TCTTTTTTTCCTCCTCAGAGACGCTGCGGCGAAAGGGCGCGAGTCCGCGG
CCCAAGTCGCACCCGCAGCTCGGGGCGGGGTGCAGAGACGTCAGCGACAA
CCAGAACAACCTGAGCCGGGAGGTGCGCCGTGGCAGTCGTGAGGGCGAGC
TGCTCAGGGACGGGCTCAGGACTTAACCCTCGCGACGCTTAGGACGGCCT
TAGGACTTAACCCTCGTAGCGCTAAGGACGGCATGAGGACCTAACCAATG
TTACGGACTTAACTCTCATGACGCTTCGGACGGGATTATAACTTAACTCT
CGCGACACTAAGGACGGGCTCAAGACGTAACCCTCGCGACACTAAGGACG
GCCTTAGGACTTAACCCTCGAGACGCTTAGGTCGGCCTTAGGACTTAACC
CTCACAGCGCTAAGGATGGCATCAGGACTTAACTTTCGCGACACTTAGGA
CAGGCTTAGGACTTAACCTTCTCAGCGCTAAGGACGGGCTTAGTACTAAT
CTCCAAGCAGATCTATAGGTTGCATGAAGACCGTATCAAATTGGCAGAGG
AAGTACGTTTTGCAACCCAAGCATTACATTACAAGCTCCTTCTTCCAGTT
GGATACGGTCTTTGCAATCCATTGGGTCTGGTTGGAAACTACTTAGTACG
GGCTTAGGACTCAACGCTAAGGATGGACTTAATTCTTACAACGCTACTGA
CGGGCTCGGGACTTAACCCTCGCGACACGAAGGGCGGCCTCGGGACTTAA
CCCTCGCGACGCTAAGGACGGACTGGTCTCTCACATAGCTAAGGACGGAT
TTGGGACTTAACCCTTACAACGCTTAGGACGGACTACTTTTTCACATCGA
GGGGGTTGAGCTCGGGACCTAACACTCACATACAGCTAAGGATGAGCCCA
GGACCGAACCTTTTCAATGCTAAGGATGGACTTAAATCTCATGACGCTTA
GGACGGGCTTAGGGCTTAATCTTCTCTCCGTTAAGAACTTATCAAAACAC
TTGGGACTTACTTAGGACTTCAACCCTCACAACGCTGAGGACGGGATAAG
GAATTAACCCTCGTGACGCTACGAACGGGCTCAGGACTTTACTCTTATTA
AGTAAGGACGGGCTCAGGATATAACCTTCTCAGCGCTAAGGATGGGCCCA
CAACGTAACCTTCACAACGCTGAGGATGTGCGTAAAACTTCGCAACGCTA
AGGACTGATAGACTAAAGGCCGGGATGCCATACTTCGAACGCTCTTAACC
TTCGGCACGCTACGGCTACGGACTGTCCGGGATCCGGGCTGAACAGTTAA
CCCACGGTACCCAAGGGTAGCCTGGTGGCCATGTTGAAACAGGGTTAACT
GTTGTGTACACGTCACTGGGAACACATATTTCAGTACAGTTCATCCATTG
CAACATAACAGGAACACTCCGTTCTCTGTATTGTATACAAAATAGACTTT
TAGTAAGAAATATACATGTAGATTAAGGGAATATTTCATCCCCAATCTCT
GCAAAAGGCGACACAAGCGGAATTTTTGGTCGAACCCAAATGTGATACGA
GAGTAATTTAGAATGAAGAAATGAAAAAAAAAAGGTTTTCGTCCCCAAAG
CCAACAAGGGACAAACAAGACATGCCATATTTAGTATATAGTACATATTA
GTGGATTCCGTTGGTTTTAGCCGTATTCTGTATATTCGATTCTGACATTT
ATCTTTTCATATTTCACATTCTGAGTATACACGGTTGACTGTCCTCTATA
AAACAACGGTTGTATGGCCTAACAATGTACAGGAAATGCTCACTACTCAA
TTAGGAGAAAAAGATATTGTAAATTCCTTCTATGTAATAATACGCCAAGG
ATATCACATATGCAAGGCGTCGCTCTCTGCGCACCATTTACTAGATGAAA
TATTCTTCTGAAACTGCTGCGTACAGCAGTTGTCGGCGGTTGCGCTGTAC
CATACACTCAGTAATGTACATATTTATTGGAAATCGACCGTTTCCGGGAA
TGGAGTAATAAATACTGGTGTTTATGATCCACGTCTGGTTTCTGCTTGTG
TGGTTGGGCTGTTGATCATACCATTGCCAAATAAGGCAATATGCTTTGAA
ATGTTTCCGGGAATTGAGTAATAGATACTGGTGTTTATGATCCACGTCTG
CCTTCTGCTTGTGTGGTAGGGCTGTTGATCATAGTCATCGTACCAAATAA
GGCAGCATGTTTTGAAATGTTTCCGGGAATTGAGTAATAGATGCTGGTGT
TTATGATCACATCTGCCTTCTGCTTGCGGGGTAGGGCTATAGTCATCATA
CCAAATAAGGCAGTATGTTTTGAAATGTTTCCGG Coding sequence (CDS) from alignment at Sc0000000:778439..785072+ >BlTCONS00000103 ID=BlTCONS00000103|Name=BlTCONS00000103|organism=Branchiostoma lanceolatum|type=CDS|length=717bp|location=Sequence derived from alignment at Sc0000000:778439..785072+ (Branchiostoma lanceolatum)
AGATACCTGGGCGGAAATGGCGCGGACCCCAACCTGCGCCTGCGGAATGC
TGGGAAGGATGACGCAGGCATGTACACGTGCGTGGCCGATCACGAGGCGA
GGCAGGGCAGGGCCAGTCTCAAGTTAGAGGTGCTCTATCCGCCCACCATA
ATCCACATCTCGGGATCGCTCACCATGGCGTCCGGCGACTCCGTCAAGCT
GTACTGTCGGGCAGACGGCTACCCCAAACCGGTCATCAGGTGGTTGAAGG
AGGGGCTTCTGCTGCCGACTGACCTTCAAACTTCAACAGGAGAGGTCAGC
ATGATGACCTTGTCCAACCTCAACATCAACGACAGCGGCCAGTACGCATG
CTCCGCCAGCAATGACGTCGGCAGCGCGGACGCCAAAACGCTGAGGCTTA
CTGTGCAAGACATGGTGGCCCGGCAGAGCTCCGGGAAGAAAGGCAGCTCC
ACGCGGACCGCCATCATCGCCGGGGCCGTCGCGGGGGGTCTGTGGCTGCT
GCTGTGCCTCGTGCTGCTCATCATCTGGGCCAGGCGGCGTCGGGAGCGTC
TGAAGAAGCGCGCCAGGAACCCGCCGTACTACTCCGTCGGCATGAAGGAG
TTCGACTACTACCCCAGAGGGAGGCAGTCCATAGACAAGGACAGCGGTGC
CGTGCGGTACCTCACGGACTCACACAGCGACATGGGTAAGTACGGTACAG
GGGGAGGCAGTCCATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00000103-exon-Sc0000000-1564993656:778439..778575 | BlTCONS00000103-exon-Sc0000000-1564993656:778439..778575 | Branchiostoma lanceolatum | exon |
| BlTCONS00000103-exon-Sc0000000-1564993656:778955..779057 | BlTCONS00000103-exon-Sc0000000-1564993656:778955..779057 | Branchiostoma lanceolatum | exon |
| BlTCONS00000103-exon-Sc0000000-1564993656:779491..779660 | BlTCONS00000103-exon-Sc0000000-1564993656:779491..779660 | Branchiostoma lanceolatum | exon |
| BlTCONS00000103-exon-Sc0000000-1564993656:780297..780420 | BlTCONS00000103-exon-Sc0000000-1564993656:780297..780420 | Branchiostoma lanceolatum | exon |
| BlTCONS00000103-exon-Sc0000000-1564993656:780603..780920 | BlTCONS00000103-exon-Sc0000000-1564993656:780603..780920 | Branchiostoma lanceolatum | exon |
| BlTCONS00000103-exon-Sc0000000-1564993656:781454..781531 | BlTCONS00000103-exon-Sc0000000-1564993656:781454..781531 | Branchiostoma lanceolatum | exon |
| BlTCONS00000103-exon-Sc0000000-1564993656:782066..782251 | BlTCONS00000103-exon-Sc0000000-1564993656:782066..782251 | Branchiostoma lanceolatum | exon |
| BlTCONS00000103-exon-Sc0000000-1564993656:782757..785072 | BlTCONS00000103-exon-Sc0000000-1564993656:782757..785072 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000000 | genome | Sc0000000:778439..785072 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF000052 |
|
