BlTCONS00000083 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00000083
Unique NameBlTCONS00000083
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000000:595027..597947+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00000083 ID=BlTCONS00000083|Name=BlTCONS00000083|organism=Branchiostoma lanceolatum|type=mRNA|length=2921bp|location=Sequence derived from alignment at Sc0000000:595027..597947+ (Branchiostoma lanceolatum)
ATCAGGGCTCGCTGACGGAACACGGGGCAGGCTACACCTTATACTGGTCT GGGAAAGGGAAAGATGAACGCAGGCAGTCAGGAGTCGGCTTCATGATAGA GAACAGTATTGCCAACAAGCTACAGAACCTCCCAGTCGGTCACTCTGACC GACTCATGTCTCTTCGGCTACCATTGCAGGACAACCAGTTTGCTACACTC ATCAGTGTCTACGCCCCTACTCTTCAGGCAGATCCTGGTACCAAAGAAGT GTTCTACTCGGAGCTGAGATCTCTACTGGCGAGCGTGAATGAAGCAGACA AGATACTGGTTTTGGGCGACTTCAACGCCAGAGTGGGCAGGGACAATGAG GTTTGGCCAGGAGTCCTTGGACGGCATGGAGTGGAAAATTGCAATGACAA CGGGAGACTGCTACTAGAGCTCTGTGCAGAAAGAGGGTTGAGCATTACCA ACACACTATTCCATCAGAAAGCCCGCTTCAAGACAACGTGGAGACACCCA CGATCGAAACATTGGCATCTGTTGGACTACATCTTGGTGCGGCAGAGGGA CATATCAGATGTGCTACACACGCGAGTCATGCCTAGCGCTGACTGCTTCA CAGATCACCGCCTAGTCAGAGCAAAGCTTCGGCTTTCCATCAAGCCACCA GTAAAGCGGAAAGGTCCAGAGATGANCCAGTAAAGCGGAAAGGTCCACAG ATGAAGAGAGTTCAGGTAGACAGACTACTTGGTCTGAGGGAGGAATTTCA GAGCAAGCTGGATGTGCGTCTAAACAGCAACAAGGGTCAGTGGCAGAAGG AGGACCCTGAGAGCCAGTGGAAGCAACTGAAAGCCGCTCTACAAGAAACA GCTGCAGAGGTAGCAGGGTACTCGTCCAGAAAGAATCGGGATTGGTTCGA CGAAAATGACCCTGCGATTGATGCCCTCCTCCAAACCAAGCGCTCCTGTC ATCAGAGAACCCTATCTAAGCCGGACGACCCTGCAGCCAAAGCAGCATAC AGGGAAGCCTGCAGCACTCTTCAGCGCAAGCTTCGGGAGATGCAGAACAG CTGGTGGGTCAACATGGCCGAGAAAACACAGCACTTCGCAGACATAGGCA ACGTGCATGCTTTNTAGGCAACGTGCGTGCTTTCTATGAAGCACTGCGTG CCATTTACGGTCCTACACACCGGATCCAGGCTCCCTTGCGATCAGCAGAT GGCTCCCAACTCCTTACTGACAAACCAGCCATTCTCCATCGGTGGTCCGA ACACTACGGCAACCTTTTTGGAGACAGACGCCAAGTACAGGAAGAGTCCA TAATGAGAATCCCCCAGCATGAAGTTAGGGTGGAACTGGACAACACACCA ACACAGGAGGAGGTGAAGACGGCCATCTCAAAACTGAAGTGCCACAAGGC TCCAGGAGTGGATGGAATTCCAGCAGAGGTCTACAAAGTCGGTGGGGATG CACTCCTTGAGAGACTCACCGGACTGTTTGCCACCTGCTGGGAACAAGGA GTTGTACCACAAGACCTGCGTGATGCCGTTATTGTCTCACTGTATAAAAA CAAAGGGGAAAAGTCGGACTGCTCCAACTACAGGGGAGTTACCCTGCTGT CCATAGCAGGGAAGATACTGGCAAGAGTTGTACTGGATAGACTCATCCCA ACCATTGCTGAAGAGAACTTAACAGAGAGCCAGTGCGGCTTTAGAGCCAA GCGTGGAACGACAGACATGATATTTGTGCTGCGCCAGATACAGGAGAAAT GCAGGGAGCAGAACATGGGGCTGTATGCGGCTTTTATAGATCTGACAAAA GCCTTTGACACGGTAAGCCGAGATGGGCTCTGGAAGATCTTATCAAGGCT CGGATGTCCGCCAAAGCTCCTTGCGATCCTACAACAGCTGCATGAAGGAC AGAAGGGTCAAGTGAAGCACAGCGGAGACCTGTCAGAGCCGTTCCCGATC GACAATGGAGTCAAGCAAGGATGCGTCCTTGCCCCTACTCTCTTCGCCAT CTTCTTTAGTATGATGCTGAGAGAGGCCAAGGAGGATCTCACTGAGGGGA TCTACATCAGGTTCAGAACGGACGGTAGCATCTTTAACCTCAGGAGACTT CTAGCCCGCACAAAGACACTGGAAGAGCTGATCCTCGATTTGCTGTTCGC AGATGACTGTGCACTCCTGGCTCACACAGAGGAAGCCCTACAGACAGTTG TCAACCACTTTGCAGAAGCATGTAAGGCCTTCAGGCTCACCATCAGCCTC AAGAAAACGGAGGTGATGTACCAGAAGCCACCACGTGGAACCTACACCCC TCCACAGATCAGCATTGATGGGCAGTCTCTGAACGCAGTCGAGCACTTCA CTTACCTGGGGAGTGTCATCTCCAACGATGCTACAGTGACCAAGGATGTG GACAGCAGACTTGGCAAAGCCTGCAGCTCGTTCGGGCGGCTACAGAAGCG TGTCTGGAAGAACCACTCACTACGTCTCTCAACAAAGATCCAGGTGTATA GAGCAGTAGTCATCACCACTCTTCTGTACGGTGCTGAGATTTGGGTCCTG TACCGGAAGCAGGTGCGACTCCTGGAGCGCTTTCACCAGCGATGCCTGCG GTGCATCATGGGCATCAAGTGGCAGGACTATGTGACAAACATTGAAGTCT TGGAGAGAGCAAACCTCCCCAGCATGGAGGCACTGCTGCTGTCAAAGCAG CTCCGATGGGCTGGCCACTTATCACGGATGGAGGACTCCAGAATGCCCAA AGCTGTCTTCTACAGTGAGCTGTGCCAGGGCAAGCGGGACAGGGGAGCCC CCAGAAAACGTTACAAAGACCAACTTAAACGTCAACTCAGCTCAGCCGGC ATTCCAGTAAAAGAATGGGAGAACATTGCAAATGACAGAAACGCCTGGAG AGCAGCAACCAAAAGAGGTGC

Coding sequence (CDS) from alignment at Sc0000000:595027..597947+

>BlTCONS00000083 ID=BlTCONS00000083|Name=BlTCONS00000083|organism=Branchiostoma lanceolatum|type=CDS|length=1617bp|location=Sequence derived from alignment at Sc0000000:595027..597947+ (Branchiostoma lanceolatum)
ATGAGAATCCCCCAGCATGAAGTTAGGGTGGAACTGGACAACACACCAAC
ACAGGAGGAGGTGAAGACGGCCATCTCAAAACTGAAGTGCCACAAGGCTC
CAGGAGTGGATGGAATTCCAGCAGAGGTCTACAAAGTCGGTGGGGATGCA
CTCCTTGAGAGACTCACCGGACTGTTTGCCACCTGCTGGGAACAAGGAGT
TGTACCACAAGACCTGCGTGATGCCGTTATTGTCTCACTGTATAAAAACA
AAGGGGAAAAGTCGGACTGCTCCAACTACAGGGGAGTTACCCTGCTGTCC
ATAGCAGGGAAGATACTGGCAAGAGTTGTACTGGATAGACTCATCCCAAC
CATTGCTGAAGAGAACTTAACAGAGAGCCAGTGCGGCTTTAGAGCCAAGC
GTGGAACGACAGACATGATATTTGTGCTGCGCCAGATACAGGAGAAATGC
AGGGAGCAGAACATGGGGCTGTATGCGGCTTTTATAGATCTGACAAAAGC
CTTTGACACGGTAAGCCGAGATGGGCTCTGGAAGATCTTATCAAGGCTCG
GATGTCCGCCAAAGCTCCTTGCGATCCTACAACAGCTGCATGAAGGACAG
AAGGGTCAAGTGAAGCACAGCGGAGACCTGTCAGAGCCGTTCCCGATCGA
CAATGGAGTCAAGCAAGGATGCGTCCTTGCCCCTACTCTCTTCGCCATCT
TCTTTAGTATGATGCTGAGAGAGGCCAAGGAGGATCTCACTGAGGGGATC
TACATCAGGTTCAGAACGGACGGTAGCATCTTTAACCTCAGGAGACTTCT
AGCCCGCACAAAGACACTGGAAGAGCTGATCCTCGATTTGCTGTTCGCAG
ATGACTGTGCACTCCTGGCTCACACAGAGGAAGCCCTACAGACAGTTGTC
AACCACTTTGCAGAAGCATGTAAGGCCTTCAGGCTCACCATCAGCCTCAA
GAAAACGGAGGTGATGTACCAGAAGCCACCACGTGGAACCTACACCCCTC
CACAGATCAGCATTGATGGGCAGTCTCTGAACGCAGTCGAGCACTTCACT
TACCTGGGGAGTGTCATCTCCAACGATGCTACAGTGACCAAGGATGTGGA
CAGCAGACTTGGCAAAGCCTGCAGCTCGTTCGGGCGGCTACAGAAGCGTG
TCTGGAAGAACCACTCACTACGTCTCTCAACAAAGATCCAGGTGTATAGA
GCAGTAGTCATCACCACTCTTCTGTACGGTGCTGAGATTTGGGTCCTGTA
CCGGAAGCAGGTGCGACTCCTGGAGCGCTTTCACCAGCGATGCCTGCGGT
GCATCATGGGCATCAAGTGGCAGGACTATGTGACAAACATTGAAGTCTTG
GAGAGAGCAAACCTCCCCAGCATGGAGGCACTGCTGCTGTCAAAGCAGCT
CCGATGGGCTGGCCACTTATCACGGATGGAGGACTCCAGAATGCCCAAAG
CTGTCTTCTACAGTGAGCTGTGCCAGGGCAAGCGGGACAGGGGAGCCCCC
AGAAAACGTTACAAAGACCAACTTAAACGTCAACTCAGCTCAGCCGGCAT
TCCAGTAAAAGAATGGGAGAACATTGCAAATGACAGAAACGCCTGGAGAG
CAGCAACCAAAAGAGGT
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000083-exon-Sc0000000-1564993656:595027..597947BlTCONS00000083-exon-Sc0000000-1564993656:595027..597947Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000083BlTCONS00000083-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000000genomeSc0000000:595027..597947 +
Properties
Property NameValue
GeneIDBlCUFF000045