BlTCONS00000049 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00000049
Unique NameBlTCONS00000049
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000000:390779..394007+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00000049 ID=BlTCONS00000049|Name=BlTCONS00000049|organism=Branchiostoma lanceolatum|type=mRNA|length=3229bp|location=Sequence derived from alignment at Sc0000000:390779..394007+ (Branchiostoma lanceolatum)
CACGCCCTCAGGTCAGTACCCTCTAACCTCTACCCCCTAACCCCCCACTA CACGGACCCGGACACGCGCCCCGTCCCGCCCTGGGTCCGCCGTCTGCTGC TCAGCGGGATCGGCCGCGTCTTCTGCACGCCCTCAGGTCAGTACCCTCTA ACCTCTACCCCCTAACCCCCCACTACACGGACCCGGACACGCGCCCCGTC CCGCCCTGGGTCCGCCGTCTGCTGCTCAGCGGGATCGGCCGCGTCTTCTG CACGCCCTCAGGTCAGTACCCTCTAACCTCTACCCCCTAACCCCCCACTA CACGGACCCGGACACGCGCCCCGTCCCGCCCTGGGTCCGCCGTCTGCTGC TCAGCGGGATCGGCCGCGTCTTCTGCACGCCCTCAGGTCAGTACCCTCTA ACCTCTACCCCCTAACCCCCCACTACACGGACCCGGACACGCGCCCCGTC CCGCCCTGGGTCCGCCGTCTGCTGCTCAGCGGGATCGGCCGCGTCTTCTG CACGCCCTCAGGTCAGTACCCTCTAACCTCTACCCCCTAACCCCCCACTA CACGGACCCGGACACGCGCCCCGTCCCGCCCTGGGTCCGCCGTCTGCTGC TCAGCGGGATCGGCCGCGTCTTCTGCACGCCCTCAGGTCAGTACCCTCTA ACCTCTACCCCCTAACCCCCCACTACACGGACCCGGACACGCGCCCCGTC CCGCCCTGGGTCCGCCGTCTGCTGCTCAGCGGGATCGGCCGCGTCTTCTG CACGCCCTCAGGTCAGTACCCTCTAACCTCTACCCCCTAACCCCCCACTA CACGGACCCGGACACGCGCCCCGTCCCGCCCTGGGTCCGCCGTCTGCTGC TCAGCGGGATCGGCCGCGTCTTCTGCACGCCCTCAGGTCAGTACCCTCTA ACCTCTACCCCCTAACCCCCCACTACACGGACCCGGACACCCGCCCGGTC CCGCCCTGGGTCCGCTGTCTGCTGTCGGCCACTACACGTCTTCTGCACGC CCTCAGGTCAGTACCCTCTAACCCCCAACCCCTAAGCCCTATCGTTTGTT TGTTTGTTTGTCTGTGCTACCGTTGTTGTTGTTTGTGCCTACATGTCCGG AGAACCCGTAGCTCAAGATGCGGTTCGGGAGAAACCAACCGCAGTATTGA GCTGAGCCTTTCCTACTGTAGTCACCTAGGGCACCCTGTGTTTGTTTGTT TGTGCTAACGTTGTGCTTTGTCTCTGCAGGTCCAGAGAAACCGCCTCCCA GTATCGAACCGAGCCTGTCCCACTGCAGTCAGCTGGAGATCCTGTGTGAG GACTTGGAGCTGGAGCTGTACCGGAACGGGAAGTTACGTAAGGAGAAAAC CAGCCAATCAGAGCAGGACTTTCCCCTCCGTCAGGCCACCCTACTGCGCG CACTGCGCACGCTCACCAGGGAGATCCAGCATCACGTGATAAGCTGTCAC CAGGCGCGTTGGACCAATGAGGAGACAGAAAACGAGTGGAAGAAAGTCGG GAAGGTTCTGGACAAGTTCTGCGTTACCATGTTTACCGCTGTGACCGTCC TTACCGCCATCGGGATGGCGCTGAAAATACCCAAGATGAACCTACAATAG GTAAAAGATCGAGGGTCATCGAGATTATCTGAATGTCAAAGGTCACGATG ACAATATTAACTGCGGCGACCGTCCTTACCGTCATCGGGGAAATACGCAA GGTGAACCTACAATAGGCCAAGGGTCACCGAGATTATCTGAATGTTAAAA GTCATGGGTCATCGAGATTATCTGAATGTCTTCTTTAATCTCGGTGGCGC TAAAAATATTAGAAATGCACATACAGAAGCGTAATGTTCACGTTGAAGGT CAAGTTAAAGGGCCACAAGGTCAAATTTCATGGCCATCAGAAGATTTCTT TTCGTGCTCAACATCATCGCAATGGCCTTCAAAATACGACTGATATGAAC ACTCAGTGTCGCAATCTACTGCTAGAAAGGTCACAGTGACAGAATTAAGT TCAAAGTTCAAAGACCATAGTCATCGCAACATTCTCTTTATTTCCCCGGG AAAAAACGTTACGCAGTTAGACGAGGCCAGAACTATGTGACCAAAAAACT GTTATCATAAAAGCGGTGCTTATATGTAGTAAGATGTAGCTGCTATGGGA AAGTGGGGAAGGGGACACCTATATAACGTCCCTCTCTGGGTTTCTTGTAA TCTAGATGTATAGAAATCTGGATATTGTACGTTCTCTACTGGAGTGTCTT AGTAGAACTGAGATTGGTAAGGGCTACAGTAAGGTGTGGGTAACCGTTGG TTCTTATGGATTGTAGTGTAAATCGTGTGTGGTGTGTCACAGAGCGTTGT GTTTAGACCAGAGTTGCTTCGTCCTATCAGTGACCGGCTGGTGCCGAGCA TCCGAAGATCACCTCACCTGCTGGATTTTACTGTATTTCAAATTATCACA GTTACATTTACTGAAGACTGCAAAGCATCAGCTAAGAGCTGCTGCCGAGA GTACCCGAAGATCGGCGAAGAGCTGGCGCCGATTGCACCCGACGATCACC GAAGAGCTGGCGCCGAATGCACCCGACGATCACCGAAGAGCTGGCGCCGA ATGCACCCGACGATCACCGAAGAGCTGGCGCCGAATGCACCCGACGATCA CCGAAGAGCTGGCGCCGATTGCACTTGACGACCACCGACGAGCTGATGCC ACCGATGTACCCGAAGATTGGCGAAGAGCTGGCGCTGATATGATTGCACC CGCCGGCCGCCGAAGAGCGGATGCCGAATGTACCCGAAGATCGGCGAAGA GCTGGTGCCGAATGCACCCGAAGATCGTCGAAAAGTTTACAAAGACATTA TGTTTGGAGGAATATGTGTACAATAAAACACGTTACGGTGTCTTTATTCT GATGTCATATATAAAGTAATTGTCATGATGAGTGTCACCCCCATCTTGAG ATAGTGGTGGGGCCCAGAACTGGGGAGAGGTCCGGTGTCAGTGACCTGGG GCAGATCTCAGAGTGCTGAGAAGTGGCCGGATTGTTCATGAGTGGAATAA AAGGAGTGGGAACCGATATCTTGGGCGTCCGTCTGTTCTGTGTCGAAGGA ACCTGTCACAGTAATCATATAGATATTTCACGTCTTTTTCCGATGGAGTC TTCTGTATCTTCCCAGCTTGAACAGTTAACGTGATTGATTTATAATCGCC ACCATAGTCATGACGTGACACGAAAACAA

Coding sequence (CDS) from alignment at Sc0000000:390779..394007+

>BlTCONS00000049 ID=BlTCONS00000049|Name=BlTCONS00000049|organism=Branchiostoma lanceolatum|type=CDS|length=381bp|location=Sequence derived from alignment at Sc0000000:390779..394007+ (Branchiostoma lanceolatum)
ACGCCCTCAGGTCCAGAGAAACCGCCTCCCAGTATCGAACCGAGCCTGTC
CCACTGCAGTCAGCTGGAGATCCTGTGTGAGGACTTGGAGCTGGAGCTGT
ACCGGAACGGGAAGTTACGTAAGGAGAAAACCAGCCAATCAGAGCAGGAC
TTTCCCCTCCGTCAGGCCACCCTACTGCGCGCACTGCGCACGCTCACCAG
GGAGATCCAGCATCACGTGATAAGCTGTCACCAGGCGCGTTGGACCAATG
AGGAGACAGAAAACGAGTGGAAGAAAGTCGGGAAGGTTCTGGACAAGTTC
TGCGTTACCATGTTTACCGCTGTGACCGTCCTTACCGCCATCGGGATGGC
GCTGAAAATACCCAAGATGAACCTACAATAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000049-exon-Sc0000000-1564993656:390779..390789BlTCONS00000049-exon-Sc0000000-1564993656:390779..390789Branchiostoma lanceolatumexon
BlTCONS00000049-exon-Sc0000000-1564993656:392008..394007BlTCONS00000049-exon-Sc0000000-1564993656:392008..394007Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000049BlTCONS00000049-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000000genomeSc0000000:390779..394007 +
Properties
Property NameValue
GeneIDBlCUFF000027