BlTCONS00000043 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00000043
Unique NameBlTCONS00000043
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000000:372950..374384+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00000043 ID=BlTCONS00000043|Name=BlTCONS00000043|organism=Branchiostoma lanceolatum|type=mRNA|length=1435bp|location=Sequence derived from alignment at Sc0000000:372950..374384+ (Branchiostoma lanceolatum)
TTATCGGAACACATGAGAACCCATACAGGAGAAAGGCCTTACAAGTGTGA CCAGTGCGACTATTCTGCTGCACAGAAATCTCATTTTGACCAACATCGAA GAAAGCACACTGGTGAGATACCCTACATGTGTGGGGAGTGTGGGTTCAGG ACAGCTTCGAAGACTGACTTATCCCGTCACATGAGAATCCATACTGGAGA AAAACCCTACAAGTGTGACCTGTGCGACTACTCTGCAGTAAGGAAATCAC ACTTAGACCGACATGTAGCAAAACATACTGGTGAAAAGCGTTACAAGTGT GACCAGTGCGACTATTCTGCAGTAAATAAATCACACTTAGTTGACCATAA AGTGAAACATACTTGTGAAAAGCCCTACATGTGCAAGGAGTGTGGGTACA GAACAGCTCAAAAGTGTAACTTATCCCTTCACATGAGAAAGCATACAGGT AACAAACCCTACAAGTGTGACCAGTGTGACTATTCTGCTGCACAGAATGC TGAACTGGACATTCATTTGGCAAAACACAAAGGTGATCATGAGAAACCAA GGGGGGTTAGAGAGAAACCCTATATTTGTGGGGAGTGTGGGTACAGGACA GCTGATAGAGTTAACTTAGCCATACACAAAAGAACCCATACAGGAGAGAA GCCCTACATGTGTGGGGAGTGTGGGTACAGAGTAGCTAGAAAGTTTAGGT TAAAGGAACACATGAGAACCCATACAGGAGAAAGGCCTTACAAGTGTGAC CAGTGCGACTATTCTGCAGTAAACAAATCACACTTAGCCATACACATGAG AACCCATACAGGTGAAAGGCCTTACAAGTGTGACCAGTGCGACTATTCTG CTGCACAGAAATCTCTTTTAAACCAACATCGAAGAAAGCACACTGGTGAG ATCAGACCGGATCACAAGGCTGGCATGACCCTGCATATGCAAACTCACGC AAAACCCTACAAGTGTGACCAGTGTGACTATTCTGCTGCACAGAAGGCTG AACTGGACATTCATTTGGCAAAACACAAAGGTCATCATGAGAAACCCTAC ATGTGTGGGGAGTGTGGGTACAGAGCAGCTAGAAAGTCAAGGTTATCGGA ACACATGAGAACCCATACAGGAGAAAGGCCTTACAAGTGTGACCAGTGCG ACTATTCTGCTGCACAGAAATCTCATTTTGACCAACATCGAAGAAAGCAC ACTGGTGAGATACCCTACATGTGTGGGGAGTGTGGGTTCAGNCAACAATG TGCAACTATATTGTAATTTAGATCTGATTGAAAAACAACATTGTGAAACA TTGTTCAACGTTCTGTGTTAATGAGTGTTTGCCTTCACTTTCTGACAGCT ATGAGCATGTGACTTTCTCATTTCCGAATAAAGAGTGATTTCACTACTTG AAAAGTGTGTATCATGTTTTATTATTGTAGCGAAG

Coding sequence (CDS) from alignment at Sc0000000:372950..374384+

>BlTCONS00000043 ID=BlTCONS00000043|Name=BlTCONS00000043|organism=Branchiostoma lanceolatum|type=CDS|length=1266bp|location=Sequence derived from alignment at Sc0000000:372950..374384+ (Branchiostoma lanceolatum)
TTATCGGAACACATGAGAACCCATACAGGAGAAAGGCCTTACAAGTGTGA
CCAGTGCGACTATTCTGCTGCACAGAAATCTCATTTTGACCAACATCGAA
GAAAGCACACTGGTGAGATACCCTACATGTGTGGGGAGTGTGGGTTCAGG
ACAGCTTCGAAGACTGACTTATCCCGTCACATGAGAATCCATACTGGAGA
AAAACCCTACAAGTGTGACCTGTGCGACTACTCTGCAGTAAGGAAATCAC
ACTTAGACCGACATGTAGCAAAACATACTGGTGAAAAGCGTTACAAGTGT
GACCAGTGCGACTATTCTGCAGTAAATAAATCACACTTAGTTGACCATAA
AGTGAAACATACTTGTGAAAAGCCCTACATGTGCAAGGAGTGTGGGTACA
GAACAGCTCAAAAGTGTAACTTATCCCTTCACATGAGAAAGCATACAGGT
AACAAACCCTACAAGTGTGACCAGTGTGACTATTCTGCTGCACAGAATGC
TGAACTGGACATTCATTTGGCAAAACACAAAGGTGATCATGAGAAACCAA
GGGGGGTTAGAGAGAAACCCTATATTTGTGGGGAGTGTGGGTACAGGACA
GCTGATAGAGTTAACTTAGCCATACACAAAAGAACCCATACAGGAGAGAA
GCCCTACATGTGTGGGGAGTGTGGGTACAGAGTAGCTAGAAAGTTTAGGT
TAAAGGAACACATGAGAACCCATACAGGAGAAAGGCCTTACAAGTGTGAC
CAGTGCGACTATTCTGCAGTAAACAAATCACACTTAGCCATACACATGAG
AACCCATACAGGTGAAAGGCCTTACAAGTGTGACCAGTGCGACTATTCTG
CTGCACAGAAATCTCTTTTAAACCAACATCGAAGAAAGCACACTGGTGAG
ATCAGACCGGATCACAAGGCTGGCATGACCCTGCATATGCAAACTCACGC
AAAACCCTACAAGTGTGACCAGTGTGACTATTCTGCTGCACAGAAGGCTG
AACTGGACATTCATTTGGCAAAACACAAAGGTCATCATGAGAAACCCTAC
ATGTGTGGGGAGTGTGGGTACAGAGCAGCTAGAAAGTCAAGGTTATCGGA
ACACATGAGAACCCATACAGGAGAAAGGCCTTACAAGTGTGACCAGTGCG
ACTATTCTGCTGCACAGAAATCTCATTTTGACCAACATCGAAGAAAGCAC
ACTGGTGAGATACCCTACATGTGTGGGGAGTGTGGGTTCAGNCAACAATG
TGCAACTATATTGTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000043-exon-Sc0000000-1564993656:372950..374384BlTCONS00000043-exon-Sc0000000-1564993656:372950..374384Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00000043BlTCONS00000043-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000000genomeSc0000000:372950..374384 +
Properties
Property NameValue
GeneIDBlCUFF000029