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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000000:25509..29694+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00000001 ID=BlTCONS00000001|Name=BlTCONS00000001|organism=Branchiostoma lanceolatum|type=mRNA|length=4186bp|location=Sequence derived from alignment at Sc0000000:25509..29694+ (Branchiostoma lanceolatum)
GTGCGAAAGCGTGGATTTATGACGGAGGGAGACCCTCGGTTATCGGACAG
CCATCGCAGCAGATACAGCCCGTGCGTCAATCTCCCCCCAGTTAGCGAAT
CGACAGCCTCTCGCGTCCCCCCGTCCCGACGAAGGCCTCCTCATCCCTTA
TTCGCTCCTGGACCGGTTCCTCCGTGGGCCCCTCTCCACCGCGCGTCTGC
CTGAAGCACCTGCTAACGTCCGGATTGCAGCCGAGTTGCCCCGTCTCTAC
ACCAGGGCCCCTTCCCAGCGTGGTGCATCTCCACTGTGAGTGTGTAGGGT
CTGTCACCACCACCAGAAGCATCTGCTACTGTAGTGGATTGCATCTCTCT
ACACCAGGCCCCACCACTGTGAGTGTGCAGGTATTCACCACTACTGCGTG
TGTGTTTAACACTGCGAGTGTGTTTAACACTGCGAGTCTGTGGAGTCAGT
GTGCACCGTCCGTGTGAGCCACACTGGAGCTCAGCCCTGCTGATTTGATG
CGGAGCGGCACACCTCCGGAATTCTGATCCGAGCCCATTCATTGGCCCGT
CTCCATTGGCCCTGCACCAGCCTGCCGTCCTGTGGCAGTTCTGTAGCGAT
CCGGCATCGTCACATTTGTAGCAGACACTGTAGCAGTGCAGTTAGCAGTC
CTGTGTAGCAGTCCTGTGTAGCAGTCCACTGTAGCCGTTCTGTGGCCACC
GAAGCTCCGCTGGAAAAGGGAAAGTTCTCTCTCCACCAGGTAAGCCAACT
TTGCTCCCATCTAACCCTCCGACGGGGGAAAGCCGCTGAGAATTCCCGGC
CGTGCAGTTTTAGGGAATTCCCGGTAGTGTATGTACATCGGGCTGAATTC
CCGGTAGTGTATGTACATCGGGCTGGTCCCCTGGGGCTGGAATTACAATA
TCAGCCCGGCGTGCTCAGTTGGCTGCATAAGTGCTGGAGGGAGGCAGTGC
TCTGTTCAGGTGGGTTATCAGCGCAAATTTGGGCCAGGTTTCCTGTCGAG
TGTTCAGGTATCCTCTCTCTCTCTAGCCTCGTTTGCAGGCTCTATGAGTC
AGGCTTTATCCTGATGGCATGGTCAGTTCTCTTGCACAGGATTTCCTACC
CAGTGGCTAAATTCTATTGCACTCAGTTTCTATTCCATTACACGTACGAG
GCCACAGCGAACTGGGTGCAGCATAAACCGTGTGTAATTGATTTGCCGTC
AGAAAAAAAGCTTTTCTCTGGCCTCCTTAGCAGGCTTGTCAGGCTTTTAT
TCTGATGGCCTGTTCAGTTCTATTACACACGGTTTCTGTTGATATTATTG
CACAAACAGAGCACAGCTACAACTGAGTGCAATAGAAACCCTGTGTGATA
GAACTGATATAGAACTGAACTGAGCATGACATGTAAACTGTAGTCATTTG
ATGAAACATCATAATTCTATATGCATATAAGCACTTACCTAAATGTTTTT
ATGGGACTACTTCCTTGCTTACTCAACTGAACTCACTTTTACGATGAAAT
GCCTTTAAGTGTTTAGTCAATGCTATGATTGTGATTTTACATGCAAATTT
CATGGAGCACATCTATGTAAATACCAGCCACTGATAAGTCTGCCAGATGT
GTAGTAAAGTTCCAGTCCAATCTAGCATGCCATCCGAAAAAAAGCCTGAC
TCAAAAAACTAATAGGCTTTTCTTTGATGGCCTGTTCAGTTCTAGTGCAC
TCGGTTTCTATTATATTTCACATGCAAGGCCCGACACAACAGACAGTGCA
CTAGAAACCCTGTGTAATGTGTTGATAAAACAATGTTACGTCCGTTTGTT
TATAAATCATGTTATTCTGATGAAGCCTGTAAAATTAGCCTTGATAGAGC
TAAAGTGTATTTTTAAAAAAGACAAAACAAACAAATATATAGAACTGATC
AGCCATCGGTAGAAAAGCCTGACTTGAAGAGCCTGCTCAAGAGACGACCT
CTTTCCACCTCGGGCCTCACCAAGACTATTTCTTGGTTGTCGGATTTTGA
AAAGTACCGCTAATTCGGGATACCAACATGACACCAGAGTCTGTAGAGAG
TTTAGAATCAGCAGTCTGAACACCCTGCAGCTGCATTCAGTCTTTCTTCA
ATCCTCCACAGTTCCCGGGACTGAAGAGTGTCAGTTTCCAGTTTTCCTCC
AGCCCTCTGTTTTCATGATGTGTCCTTTTGCTAAAATTCCACATAAAACT
GAACCAACAAATTAAATTTGTGTGGCCTCAAATCTATTTCTCAGACATTC
TGAAGACAAAATTTTGATGAAGACAAATGCCTGGGAGAAAAATGCCCCAC
ACGACACTTTACAATATTTACTCCCTGAAACTGTGTGTACGAGGGTGCAG
CCCTCAGACTCTGTTTTCGAAGTAAATTTCAATCTAGCATTATCTTTATA
ATCCGAGAACCAAAAGAAAACTTGGTGTGGAGTACGAGTCGGGCTGCTTC
CTGACAGCATGTACAGAAGGAAAAGCCTGATTTGTAGAGCCTGCTGCATG
AGGACTTTTTGTACACTGTAAAAGGCCCCGGTGGGAGACGAGTGCTCGCC
TCTCCCTCCACAATGCGGTGCCAGAAAGTGGCCCACAAGCCAGGCTGTTT
CCTGACGGCATATTCAGAAGGAAAAGCTGATTCTTAGAGCTTTCTGCTGC
CCAAAACAGCACCGTTAAAGGCCCTGGTGGGAGATGAGTGCTCGCCTCTC
CCTCCGCAGTTTTCCCCCAATCCTGTGCAGAAGTGGCCTCCGTGGGCTCC
AGCCCGCGATTATCGCTGCAGCGTAATCCGTAACGTTCGGCTGCGCTGAA
GGCGGCAGTGACAGATGATCGCCTGTCCCCGATACTGTTGATGCATCAAT
ATTTATATCCTGTGGCTGGAACGCGCCTCCGTGGAAATGTCATGTCGCTC
GTTCCCCAGTGTCTAGGATCGACCTCCATTCTCATTAGGGCCACGTGCGC
TTTTTATAAATTGTCCCATTTCCAAGAAAAAGCGAAACCAGGCTCAGTTT
GTCTTCATTTTCTTTGTTTTCTTGTACCAGCTCTGTGGAAATGCCATGTT
GCTGAAATCGTCCCATGTCCAAACTTGATGCAAAACTCAGCATTTCTGCA
TTTTCTTTGTTTCTGTTATATAACATCTGACAAAAGGTCATGTTACTCTT
TCCCCGGTGTCTCGGACTGACCTACAGTTCTGTGGCCATGTGAAGCATGT
GAAAAACTATCCTGTGTTCAAACGAGATGCTAAATCTTGCCATGATTGTC
TTAATTGTCATAATTTTTCGTTGAAATGGTTTCATGGCCACGTGAATCAA
GCAAATTTCAAAGCTAAAAAAAACATGCCCAGATTTTATCTGTAGTTGCT
GTGCCGGCTAAACTACCTCTTTGTCTTCCTTTCTGCACTTAATTTCTACC
CCTCCGTCTAAATGTTCTTCCTCTCCAATGTCTAGGATCACCTGCAAGTT
CGTGGCCACTTTAGCCGCTCTAACCTACAAGCTACACGCTAAAGACCGGA
TTTCTCCCTGGTTCCCGCGCCGTTAACCGCCACCCTGGAGCCCCAGTACG
GAATCAACGCCGCAGAGTTTCGCGACCCTGCCGAGTTCCGCCCCGGATAC
CGTTACCGGGAAGCAGGCAGCATGTCGAGCTACGAAGACAACGAGCCGAA
GGCGTCCGACATCAACGTGTTCGCTGGGAACGCGACGATGCACGGCATCA
GCCACATCTTCACGGAGGGCTCGTTCTCGTTCCGGCGCTTCCTGTGGGCG
GCTGCGTTCCTGATCTGCTTCGGGATGGTGTCGTACAACGGGTACGACCG
CGTGATGTACTACCTCTCCTACCCGCGCGTCACCAAGCTGGACGAGCTCG
AGGCCCAGATGATGAACTTCCCCGCCATCACCATGTGCAACCTCAACCCC
TTCCGCTTCTCCAAGGTCACCAAGGACGACCTCTGGCAGGTCGGCCAGGC
CCTGGAGATCCTCGACGAGAACAAGAAGCTGGCGCACTCGGAGTTCGTTG
ACCCGGAGCACCTGTCCACGCTGCGCCGGCTGGCGGAGTTCGGGCCGGGC
TACGTGCCGAAGAACAAGGACAGCTTCAGCATGAAGGAGTTCTACAACCG
CACGGCGCACCAGATCCAGGACATGGTGCTGGAGTGCAGCTACCGCGGAA
CCAAGTGCAGCTGGGCCAACTTCACTGTGGTAAGTC Coding sequence (CDS) from alignment at Sc0000000:25509..29694+ >BlTCONS00000001 ID=BlTCONS00000001|Name=BlTCONS00000001|organism=Branchiostoma lanceolatum|type=CDS|length=564bp|location=Sequence derived from alignment at Sc0000000:25509..29694+ (Branchiostoma lanceolatum)
ATGTCGAGCTACGAAGACAACGAGCCGAAGGCGTCCGACATCAACGTGTT
CGCTGGGAACGCGACGATGCACGGCATCAGCCACATCTTCACGGAGGGCT
CGTTCTCGTTCCGGCGCTTCCTGTGGGCGGCTGCGTTCCTGATCTGCTTC
GGGATGGTGTCGTACAACGGGTACGACCGCGTGATGTACTACCTCTCCTA
CCCGCGCGTCACCAAGCTGGACGAGCTCGAGGCCCAGATGATGAACTTCC
CCGCCATCACCATGTGCAACCTCAACCCCTTCCGCTTCTCCAAGGTCACC
AAGGACGACCTCTGGCAGGTCGGCCAGGCCCTGGAGATCCTCGACGAGAA
CAAGAAGCTGGCGCACTCGGAGTTCGTTGACCCGGAGCACCTGTCCACGC
TGCGCCGGCTGGCGGAGTTCGGGCCGGGCTACGTGCCGAAGAACAAGGAC
AGCTTCAGCATGAAGGAGTTCTACAACCGCACGGCGCACCAGATCCAGGA
CATGGTGCTGGAGTGCAGCTACCGCGGAACCAAGTGCAGCTGGGCCAACT
TCACTGTGGTAAGT
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00000001-exon-Sc0000000-1564993656:25509..26247 | BlTCONS00000001-exon-Sc0000000-1564993656:25509..26247 | Branchiostoma lanceolatum | exon |
| BlTCONS00000001-exon-Sc0000000-1564993656:28944..29694 | BlTCONS00000001-exon-Sc0000000-1564993656:28944..29694 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000000 | genome | Sc0000000:25509..29694 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF000001 |
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